RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ERICH5Q6P6B1 374 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 NPSR1Q6W5P4 371 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 HPS6Q86YV9 775 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MICU2Q8IYU8 434 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ZNF441Q8N8Z8 693 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FAM156AQ8NDB6 213 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 OR5L2Q8NGL0 311 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 NUBPLQ8TB37 319 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FBXO30Q8TB52 745 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 JADE3Q92613 823 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CDS1Q92903 461 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TP53INP1Q96A56 240 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 LCORQ96JN0 433 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 BTBD9Q96Q07 612 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 KCTD14Q9BQ13 255 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 WWTR1Q9GZV5 400 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 A4GALTQ9NPC4 353 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PCDHGB3Q9Y5G1 929 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PCSK5Q92824 1860 aa15.14■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TMEM200CA6NKL6 621 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MASP2O00187 686 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CELA2AP08217 269 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TCN1P20061 433 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MSX2P35548 267 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 UCNP55089 124 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CORO7P57737 925 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FXNQ16595 210 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ZNF630Q2M218 657 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 VMACQ2NL98 169 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 HLA-DQA1Q5Y7H0 255 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SLC44A2Q8IWA5 706 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 C17orf47Q8NEP4 570 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TNIP2Q8NFZ5 429 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 GPR151Q8TDV0 419 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SLC38A5Q8WUX1 472 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 THAP4Q8WY91 577 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PIK3R3Q92569 461 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MAL2Q969L2 176 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 WBP1Q96G27 269 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CCNL2Q96S94 520 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 BTBD2Q9BX70 525 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 DEFB126Q9BYW3 111 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 EXD2Q9NVH0 621 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 LIPT1Q9Y234 373 aa15.13■□□□□ 0.01
CDK5RAP3-228ENST00000583363 GXYLT2A0PJZ3 443 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FRG2CA6NGY1 282 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ZNF891A8MT65 544 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 A8MVJ9 347 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ANKRD65E5RJM6 399 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TO15178 435 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SERPINA7P05543 415 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TRHRP34981 398 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CDK6Q00534 326 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MS4A2Q01362 244 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 VEZF1Q14119 521 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 LY6DQ14210 128 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TRIM25Q14258 630 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SYPL1Q16563 259 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ARHGAP11BQ3KRB8 267 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CYP27C1Q4G0S4 372 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 DCAF10Q5QP82 559 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ATAD3BQ5T9A4 648 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ATP1A1-AS1Q5TC04 95 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PTRH1Q86Y79 214 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 KBTBD2Q8IY47 623 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 METTL25Q8N6Q8 603 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ANKFN1Q8N957 763 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 C11orf65Q8NCR3 313 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CHDHQ8NE62 594 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 OR4N2Q8NGD1 307 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FAM110BQ8TC76 370 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TTC9Q92623 222 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FER1L6-AS2Q96M78 137 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 RAB3IPQ96QF0 476 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 GAL3ST4Q96RP7 486 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SDF2Q99470 211 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PCDHAC1Q9H158 963 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 NXF5Q9H1B4 397 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 LIN28AQ9H9Z2 209 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 Q9N2J8 555 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ATP13A2Q9NQ11 1180 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 P2RX2Q9UBL9 471 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SLC7A8Q9UHI5 535 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 MYO18BQ8IUG5 2567 aa15.12■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CYSRT1A8MQ03 144 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SLC28A2O43868 658 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 NR2F1P10589 423 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 ITGAMP11215 1152 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 PCGF2P35227 344 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SOX11P35716 441 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 NR0B1P51843 470 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 POU6F2P78424 691 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 FUT5Q11128 374 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 TRAP1Q12931 704 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 BNIP2Q12982 314 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 CHAF1BQ13112 559 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 SCARB2Q14108 478 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 AP1ARQ63HQ0 302 aa15.11■□□□□ 0.01
CDK5RAP3-228ENST00000583363 H3F3CQ6NXT2 135 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms