RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 MBL2P11226 248 aaPredicted RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 ACP1P24666 158 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 XCR1P46094 333 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 HSPA14Q0VDF9 509 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 PTK6Q13882 451 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 MS4A13Q5J8X5 152 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 TFB1MQ8WVM0 346 aaKnown RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 ELSPBP1Q96BH3 223 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 C16orf74Q96GX8 76 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 IMMP1LQ96LU5 166 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 SPAG8Q99932 426 aaPredicted RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 C19orf43Q9BQ61 176 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 THUMPD3Q9BV44 507 aaKnown RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 TRIM9Q9C026 710 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 ARMCX3Q9UH62 379 aaPredicted RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 TEKT2Q9UIF3 430 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 CCPG1Q9ULG6 757 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 CA5BQ9Y2D0 317 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 ATG4BQ9Y4P1 393 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 PALLDQ8WX93 1383 aa2.6□□□□□ -1.99
COPS3-217ENST00000583160 DICER1Q9UPY3 1922 aaKnown RBP2.6□□□□□ -1.99
COPS3-217ENST00000583160 KDM6AO15550 1401 aaPredicted RBP2.59□□□□□ -1.99
COPS3-217ENST00000583160 UBR2Q8IWV8 1755 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 NUDT21O43809 227 aaKnown RBP2.59□□□□□ -1.99
COPS3-217ENST00000583160 NR2C1P13056 603 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 IDSP22304 550 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 IL2RGP31785 369 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 TRPC1P48995 793 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 SLC12A3P55017 1021 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 SERTAD2Q14140 314 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 NFE2L1Q14494 772 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 SEL1L2Q5TEA6 688 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 DCLRE1AQ6PJP8 1040 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 MFSD7Q6UXD7 560 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 DEPDC1BQ8WUY9 529 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 SEPT10Q9P0V9 454 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 DPM3Q9P2X0 92 aa2.59□□□□□ -1.99
COPS3-217ENST00000583160 ZNFX1Q9P2E3 1918 aaKnown RBP2.59□□□□□ -1.99
COPS3-217ENST00000583160 ARHGAP21Q5T5U3 1957 aa2.59□□□□□ -2
COPS3-217ENST00000583160 NPC1L1Q9UHC9 1359 aa2.59□□□□□ -2
COPS3-217ENST00000583160 TJP1Q07157 1748 aa2.59□□□□□ -2
COPS3-217ENST00000583160 SIPA1L3O60292 1781 aaPredicted RBP2.59□□□□□ -2
COPS3-217ENST00000583160 AFDNP55196 1824 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 PXDNLA1KZ92 1463 aa2.58□□□□□ -2
COPS3-217ENST00000583160 MRC1P22897 1456 aa2.58□□□□□ -2
COPS3-217ENST00000583160 TNRC6CQ9HCJ0 1690 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 IGLV8-61A0A075B6I0 122 aa2.58□□□□□ -2
COPS3-217ENST00000583160 FAM149AA5PLN7 773 aa2.58□□□□□ -2
COPS3-217ENST00000583160 PINLYPA6NC86 204 aa2.58□□□□□ -2
COPS3-217ENST00000583160 G3V3Y1 287 aa2.58□□□□□ -2
COPS3-217ENST00000583160 CRCPO75575 148 aa2.58□□□□□ -2
COPS3-217ENST00000583160 SLU7O95391 586 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 OAS1P00973 400 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 FCER2P06734 321 aa2.58□□□□□ -2
COPS3-217ENST00000583160 HSP90AB1P08238 724 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 NUDT17P0C025 328 aa2.58□□□□□ -2
COPS3-217ENST00000583160 TPBGLP0DKB5 382 aa2.58□□□□□ -2
COPS3-217ENST00000583160 CPA3P15088 417 aa2.58□□□□□ -2
COPS3-217ENST00000583160 B4GALT1P15291 398 aa2.58□□□□□ -2
COPS3-217ENST00000583160 TKTL1P51854 596 aa2.58□□□□□ -2
COPS3-217ENST00000583160 RIPPLY3P57055 190 aa2.58□□□□□ -2
COPS3-217ENST00000583160 GNB2P62879 340 aa2.58□□□□□ -2
COPS3-217ENST00000583160 GIT2Q14161 759 aa2.58□□□□□ -2
COPS3-217ENST00000583160 TRADDQ15628 312 aa2.58□□□□□ -2
COPS3-217ENST00000583160 STEAP1BQ6NZ63 245 aa2.58□□□□□ -2
COPS3-217ENST00000583160 ZCCHC12Q6PEW1 402 aa2.58□□□□□ -2
COPS3-217ENST00000583160 PRSS48Q7RTY5 328 aa2.58□□□□□ -2
COPS3-217ENST00000583160 GPR142Q7Z601 462 aa2.58□□□□□ -2
COPS3-217ENST00000583160 SIAH3Q8IW03 269 aa2.58□□□□□ -2
COPS3-217ENST00000583160 TUSC5Q8IXB3 177 aa2.58□□□□□ -2
COPS3-217ENST00000583160 ENTHD1Q8IYW4 607 aa2.58□□□□□ -2
COPS3-217ENST00000583160 LINC00518Q8N0U6 118 aa2.58□□□□□ -2
COPS3-217ENST00000583160 OR4L1Q8NH43 312 aa2.58□□□□□ -2
COPS3-217ENST00000583160 CCDC26Q8TAB7 109 aa2.58□□□□□ -2
COPS3-217ENST00000583160 FAM104AQ969W3 186 aa2.58□□□□□ -2
COPS3-217ENST00000583160 CXorf58Q96LI9 332 aa2.58□□□□□ -2
COPS3-217ENST00000583160 CCDC114Q96M63 670 aa2.58□□□□□ -2
COPS3-217ENST00000583160 C9orf85Q96MD7 179 aa2.58□□□□□ -2
COPS3-217ENST00000583160 FAM173AQ9BQD7 235 aa2.58□□□□□ -2
COPS3-217ENST00000583160 MLPHQ9BV36 600 aaPredicted RBP2.58□□□□□ -2
COPS3-217ENST00000583160 NMUR2Q9GZQ4 415 aa2.58□□□□□ -2
COPS3-217ENST00000583160 MIEF1Q9NQG6 463 aa2.58□□□□□ -2
COPS3-217ENST00000583160 APOBEC3BQ9UH17 382 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 MRTO4Q9UKD2 239 aaKnown RBP2.58□□□□□ -2
COPS3-217ENST00000583160 CDH7Q9ULB5 785 aa2.58□□□□□ -2
COPS3-217ENST00000583160 EMCNQ9ULC0 261 aa2.58□□□□□ -2
COPS3-217ENST00000583160 EXOC7Q9UPT5 735 aa2.58□□□□□ -2
COPS3-217ENST00000583160 ITM2BQ9Y287 266 aa2.58□□□□□ -2
COPS3-217ENST00000583160 RNF115Q9Y4L5 304 aa2.58□□□□□ -2
COPS3-217ENST00000583160 ZFP37Q9Y6Q3 630 aaPredicted RBP2.58□□□□□ -2
COPS3-217ENST00000583160 N4BP2Q86UW6 1770 aaPredicted RBP2.58□□□□□ -2
COPS3-217ENST00000583160 ARFGEF2Q9Y6D5 1785 aa2.58□□□□□ -2
COPS3-217ENST00000583160 FER1L6Q2WGJ9 1857 aa2.58□□□□□ -2
COPS3-217ENST00000583160 CCDC88AQ3V6T2 1871 aa2.58□□□□□ -2
COPS3-217ENST00000583160 ATP10DQ9P241 1426 aa2.58□□□□□ -2
COPS3-217ENST00000583160 WDR90Q96KV7 1748 aa2.57□□□□□ -2
COPS3-217ENST00000583160 A0A0A6YYD4 124 aa2.57□□□□□ -2
COPS3-217ENST00000583160 YJEFN3A6XGL0 299 aa2.57□□□□□ -2
COPS3-217ENST00000583160 SLC33A1O00400 549 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms