RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ERVK-11Q9UQG0 969 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ASPDHA6ND91 283 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 HMX3A6NHT5 357 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SSNA1O43805 119 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 DIRAS1O95057 198 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 IFNA7P01567 189 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 HMGN2P05204 90 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 CHRM5P08912 532 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 GP1BBP13224 206 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 OPRL1P41146 370 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 NUDT6P53370 316 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 OXA1LQ15070 435 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ENTPD8Q5MY95 495 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 RNF111Q6ZNA4 994 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 CCDC116Q8IYX3 515 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 CADM2Q8N3J6 435 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 MEIOBQ8N635 442 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 OR5L2Q8NGL0 311 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 CAPSLQ8WWF8 208 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 BADQ92934 168 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 S100A16Q96FQ6 103 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 EGLN2Q96KS0 407 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 AMDHD1Q96NU7 426 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 GPR83Q9NYM4 423 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 POLR1DQ9Y2S0 133 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ANXA2P2A6NMY6 339 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 OR2T1O43869 369 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 AHSA1O95433 338 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ANXA2P07355 339 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 ERCC1P07992 297 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 SLC35E2P0CK97 266 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ADORA3P0DMS8 318 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 FKBP2P26885 142 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 OR1E2P47887 323 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 DUSP3P51452 185 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 RAB8AP61006 207 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 RPL6Q02878 288 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 ZNF91Q05481 1191 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 EFR3AQ14156 821 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 QSOX2Q6ZRP7 698 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SHFQ7M4L6 423 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ZNF551Q7Z340 670 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 ZNF227Q86WZ6 799 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 FAM129CQ86XR2 697 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 HORMAD2Q8N7B1 307 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 PNPLA2Q96AD5 504 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 FGF20Q9NP95 211 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 NUFIP1Q9UHK0 495 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 HCFC2Q9Y5Z7 792 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SLC22A7Q9Y694 548 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SCN10AQ9Y5Y9 1956 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 PRSS38A1L453 326 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 A6NIZ1 184 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 J3QRK9 145 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 GAPDHSO14556 408 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 KHDRBS3O75525 346 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 LGI1O95970 557 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 HTR1AP08908 422 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ZNF823P16415 610 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 CBLP22681 906 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 ELAVL4P26378 380 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 STT3AP46977 705 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SEPHS1P49903 392 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 RAP1BP61224 184 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 RAP1AP62834 184 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SEMG2Q02383 582 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 GPR68Q15743 365 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 FAM78AQ5JUQ0 283 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 LRRC28Q86X40 367 aaPredicted RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 OR2L3Q8NG85 312 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 TMEM239Q8WW34 195 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 AKAP1Q92667 903 aaKnown RBP eCLIP5.51□□□□□ -1.53
RTTN-209ENST00000583043 TXNDC15Q96J42 360 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 SECISBP2Q96T21 854 aaKnown RBP5.51□□□□□ -1.53
RTTN-209ENST00000583043 TBC1D17Q9HA65 648 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 CLCA3PQ9Y6N3 262 aa5.51□□□□□ -1.53
RTTN-209ENST00000583043 A0A1W2PQ72 361 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CDHR4A6H8M9 788 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CPSF4LA6NMK7 179 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 SULT1B1O43704 296 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 PAK4O96013 591 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 GUSBP08236 651 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 HTR1FP30939 366 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 RORAP35398 523 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 HNRNPKP61978 463 aaKnown RBP eCLIP5.5□□□□□ -1.53
RTTN-209ENST00000583043 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 FAM182AQ5T1J6 154 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 AGAP6Q5VW22 663 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 FOXB2Q5VYV0 432 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 CCBE1Q6UXH8 406 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 ATG14Q6ZNE5 492 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 VASH1Q7L8A9 365 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 AGAP4Q96P64 663 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 INSM2Q96T92 566 aaPredicted RBP5.5□□□□□ -1.53
RTTN-209ENST00000583043 TBL1XR1Q9BZK7 514 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 SLA2Q9H6Q3 261 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 ACER3Q9NUN7 267 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 MBD2Q9UBB5 411 aa5.5□□□□□ -1.53
RTTN-209ENST00000583043 GPN3Q9UHW5 284 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms