RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 CLDN4O14493 209 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CCSO14618 274 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 EIF3HO15372 352 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMG8-205ENST00000580798 CLOCKO15516 846 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CTIFO43310 598 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 PLRG1O43660 514 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 BUD23O43709 281 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 OR10H3O60404 316 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CST8O60676 142 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 TPST2O60704 377 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ATP2C2O75185 946 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CCNKO75909 580 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 WDR47O94967 919 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 AP2A2O94973 939 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 OR4F21O95013 312 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 OXSR1O95747 527 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 FADS2O95864 444 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 RPN2P04844 631 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CA3P07451 260 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CHRM4P08173 479 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 MMP10P09238 476 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 PET100P0DJ07 73 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 TMEM225BP0DP42 221 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 SPP1P10451 314 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 FCGR2AP12318 317 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ST6GAL1P15907 406 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CBR1P16152 277 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CD36P16671 472 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ZNF7P17097 686 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 XRCC1P18887 633 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 DRD1P21728 446 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CRABP1P29762 137 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 TIA1P31483 386 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMG8-205ENST00000580798 HNRNPH3P31942 346 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 MAP3K8P41279 467 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 IER3P46695 156 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CAPZBP47756 277 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 GPR12P47775 334 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ARRB1P49407 418 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 RGS6P49758 472 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 RIDAP52758 137 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 CDH13P55290 713 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 SLC37A1P57057 533 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 AP1S1P61966 158 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 SORDQ00796 357 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 FLI1Q01543 452 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 CNTN2Q02246 1040 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ARHGAP1Q07960 439 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 RBBP4Q09028 425 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 TROAPQ12815 778 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 MED21Q13503 144 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 GRB14Q14449 540 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 TMEM44Q2T9K0 475 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ACCSLQ4AC99 568 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 AASDHQ4L235 1098 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 SBK1Q52WX2 424 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 C5orf47Q569G3 176 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 CELF3Q5SZQ8 465 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 DDI2Q5TDH0 399 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 MANEALQ5VSG8 457 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 HACD4Q5VWC8 232 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 DUPD1Q68J44 220 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ARCQ7LC44 396 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 NT5DC3Q86UY8 548 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 FAM219AQ8IW50 185 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 SLC35F3Q8IY50 421 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 C1orf87Q8N0U7 546 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 GPC2Q8N158 579 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 FAM89BQ8N5H3 189 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 KIAA0895Q8NCT3 520 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 FAM83FQ8NEG4 500 aaPredicted RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 OR5B17Q8NGF7 314 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 OR5M8Q8NGP6 311 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 OR5M1Q8NGP8 315 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 OR2L8Q8NGY9 312 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 HCAR2Q8TDS4 363 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 DNASE2BQ8WZ79 361 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 OVCA2Q8WZ82 227 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 HSD17B8Q92506 261 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 RAD54LQ92698 747 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 P2RX5Q93086 422 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 PPP1R16AQ96I34 528 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 LRRC3BQ96PB8 259 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 RAB40CQ96S21 281 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 EBNA1BP2Q99848 306 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 TTYH2Q9BSA4 534 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 COPS4Q9BT78 406 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ABHD6Q9BV23 337 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 MRPL13Q9BYD1 178 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 STRADBQ9C0K7 418 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 MIS12Q9H081 205 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 SPATC1LQ9H0A9 340 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 METTL9Q9H1A3 318 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 DPEP2Q9H4A9 486 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 C11orf49Q9H6J7 331 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 UBTD1Q9HAC8 227 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 ASAH2Q9NR71 780 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 BABAM1Q9NWV8 329 aa3.71□□□□□ -1.82
SMG8-205ENST00000580798 MYEF2Q9P2K5 600 aaKnown RBP3.71□□□□□ -1.82
SMG8-205ENST00000580798 PISDQ9UG56 409 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms