RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	TMEM64	Q6YI46	380 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	SSX8	Q7RTT4	187 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	TSPYL5	Q86VY4	417 aa	Predicted RBP	5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	CDKL3	Q8IVW4	592 aa	Predicted RBP	5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	PALM2	Q8IXS6	379 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	BPIFB2	Q8N4F0	458 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	ZDHHC22	Q8N966	263 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	ADCY4	Q8NFM4	1077 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	CCT6B	Q92526	530 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	ANKRD7	Q92527	254 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	PEX13	Q92968	403 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	MUCL1	Q96DR8	90 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	FBXL20	Q96IG2	436 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	GMPPA	Q96IJ6	420 aa	Predicted RBP	5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	SERINC2	Q96SA4	455 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	AIF1L	Q9BQI0	150 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	OSBPL11	Q9BXB4	747 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	POTEKP	Q9BYX7	375 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	C10orf88	Q9H8K7	445 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	COPS7B	Q9H9Q2	264 aa	Predicted RBP	5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	FBXO34	Q9NWN3	711 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	XPR1	Q9UBH6	696 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	DKKL1	Q9UK85	242 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	DAPP1	Q9UN19	280 aa		5.29	□□□□□ -1.56
KPNB1-209	ENST00000580158	SEC14L5	O43304	696 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ZNF189	O75820	626 aa	Predicted RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	TACSTD2	P09758	323 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	NUDT17	P0C025	328 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ENO3	P13929	434 aa	Predicted RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HIST1H2AD	P20671	130 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	FPR2	P25090	351 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	MGAT1	P26572	445 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	STT3A	P46977	705 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HNRNPH2	P55795	449 aa	Known RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HERVK_113	P63132	956 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ERVK-8	P63133	956 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	PHC1	P78364	1004 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	PLIN5	Q00G26	463 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ID2	Q02363	134 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	CHRNE	Q04844	493 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	SP140	Q13342	867 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ACAP2	Q15057	778 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	P2RY6	Q15077	328 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	EBP	Q15125	230 aa	Known RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	PPA1	Q15181	289 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	TMEM81	Q6P7N7	255 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	VHLL	Q6RSH7	139 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	TMEM108	Q6UXF1	575 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158		Q6ZPA2	131 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	C17orf107	Q6ZR85	190 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	NUP54	Q7Z3B4	507 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	WDR75	Q8IWA0	830 aa	Known RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	KLHDC8A	Q8IYD2	350 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	SPATA6L	Q8N4H0	392 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	PRELID2	Q8N945	189 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	MRAP	Q8TCY5	172 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	KISS1R	Q969F8	398 aa	Predicted RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	PPWD1	Q96BP3	646 aa	Known RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	NXNL1	Q96CM4	212 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	SNF8	Q96H20	258 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HIST1H2AH	Q96KK5	128 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	BIRC8	Q96P09	236 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	CSF3R	Q99062	836 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HIST1H2AJ	Q99878	128 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	H2AFJ	Q9BTM1	129 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ERVK-6	Q9BXR3	956 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	FOLH1B	Q9HBA9	442 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	GLRX2	Q9NS18	164 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	HIF1AN	Q9NWT6	349 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	MARCH4	Q9P2E8	410 aa	Predicted RBP	5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	NENF	Q9UMX5	172 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	ERVK-19	Q9WJR5	959 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	CRYL1	Q9Y2S2	319 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	SPEF1	Q9Y4P9	236 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	PPIAL4A	Q9Y536	164 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	MAD1L1	Q9Y6D9	718 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158	WNK2	Q9Y3S1	2297 aa		5.28	□□□□□ -1.56
KPNB1-209	ENST00000580158		A0A087X0T9	212 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	MACROD2	A1Z1Q3	448 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	EFCAB8	A8MWE9	144 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	ALG1L2	C9J202	215 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	C4orf51	C9J302	202 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	APOC4-APOC2	K7ER74	178 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	SS18L1	O75177	396 aa	Predicted RBP	5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	HTR3B	O95264	441 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	APOC2	P02655	101 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	TUBB	P07437	444 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	FAM228B	P0C875	321 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	DHRS4L1	P0CG22	281 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	NAGA	P17050	411 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	DDX5	P17844	614 aa	Known RBP	5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	TCEA1	P23193	301 aa	Known RBP	5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	IL2RG	P31785	369 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	APOBEC3A	P31941	199 aa	Predicted RBP	5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	SLC1A1	P43005	524 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	PLA2G16	P53816	162 aa		5.27	□□□□□ -1.57
KPNB1-209	ENST00000580158	CLDN15	P56746	228 aa		5.27	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms