RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CYP27C1Q4G0S4 372 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 OR2A2Q6IF42 318 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 CDC20BQ86Y33 519 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 GRAMD2AQ8IUY3 354 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 MEIOBQ8N635 442 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 WDSUB1Q8N9V3 476 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 CCDC63Q8NA47 563 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 NTNG2Q96CW9 530 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 APIPQ96GX9 242 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 TUBA1CQ9BQE3 449 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 RBM24Q9BX46 236 aaKnown RBP12.47□□□□□ -0.41
GGA3-208ENST00000579743 Q9N2J8 555 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 SIRT5Q9NXA8 310 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 TBK1Q9UHD2 729 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 MID2Q9UJV3 735 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 TIMM22Q9Y584 194 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
GGA3-208ENST00000579743 A0A087WV62 115 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 TTC36A6NLP5 189 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 CLCA1A8K7I4 914 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 TSPAN2O60636 221 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 CRHP06850 196 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 CT45A8P0DMV1 189 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 CT45A9P0DMV2 189 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 PEPDP12955 493 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 CHN1P15882 459 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 DDX5P17844 614 aaKnown RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 GRK2P25098 689 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 PTGDSP41222 190 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 AGFG1P52594 562 aaKnown RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 DSCR4P56555 118 aaPredicted RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 CORO7P57737 925 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 RAE1P78406 368 aaKnown RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 DUSP2Q05923 314 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 KEAP1Q14145 624 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 GANABQ14697 944 aaKnown RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 CEBPEQ15744 281 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 BCL2A1Q16548 175 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 CT45A2Q5DJT8 189 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 DCST1Q5T197 706 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 IKBIPQ70UQ0 350 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 SIMC1Q8NDZ2 872 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 METTL2AQ96IZ6 378 aaKnown RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 VSTM2LQ96N03 204 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 DACH2Q96NX9 599 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 UCN2Q96RP3 112 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 EBPLQ9BY08 206 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 DDX18Q9NVP1 670 aaKnown RBP12.46□□□□□ -0.41
GGA3-208ENST00000579743 CBLCQ9ULV8 474 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 ABCG2Q9UNQ0 655 aa12.46□□□□□ -0.41
GGA3-208ENST00000579743 MED13LQ71F56 2210 aa12.46□□□□□ -0.42
GGA3-208ENST00000579743 EXPH5Q8NEV8 1989 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 CHEK2O96017 543 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 RAF1P04049 648 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 JUNP05412 331 aaKnown RBP12.45□□□□□ -0.42
GGA3-208ENST00000579743 GCAP28676 217 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 HTR6P50406 440 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 GFRA1P56159 465 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 VPS26BQ4G0F5 336 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 DESI1Q6ICB0 168 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 ZYG11AQ6WRX3 759 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 LUZP2Q86TE4 346 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 C9orf106Q8NAJ2 232 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 OR7G2Q8NG99 324 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 NRGNQ92686 78 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 EFHD2Q96C19 240 aaPredicted RBP12.45□□□□□ -0.42
GGA3-208ENST00000579743 INTS12Q96CB8 462 aaKnown RBP12.45□□□□□ -0.42
GGA3-208ENST00000579743 ALPK1Q96QP1 1244 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 CXXC4Q9H2H0 198 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 MYNNQ9NPC7 610 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 TAS2R7Q9NYW3 318 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 JKAMPQ9P055 326 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 PACSIN3Q9UKS6 424 aa12.45□□□□□ -0.42
GGA3-208ENST00000579743 EIF3LQ9Y262 564 aaKnown RBP12.45□□□□□ -0.42
GGA3-208ENST00000579743 C2CD3Q4AC94 2353 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
GGA3-208ENST00000579743 MYO1GB0I1T2 1018 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 KDM4EB2RXH2 506 aaPredicted RBP12.44□□□□□ -0.42
GGA3-208ENST00000579743 SLC28A1O00337 649 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 PLOD2O00469 737 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 RGS14O43566 566 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 SCO2O43819 266 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 SEC22BO75396 215 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 RSL1D1O76021 490 aaKnown RBP12.44□□□□□ -0.42
GGA3-208ENST00000579743 KCNH1O95259 989 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 UROSP10746 265 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 EVI2BP34910 448 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 DNAJB13P59910 316 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 RPS3AP61247 264 aaKnown RBP12.44□□□□□ -0.42
GGA3-208ENST00000579743 FGFBP1Q14512 234 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 RAET1LQ5VY80 246 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 OR5M10Q6IEU7 315 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 POMZP3Q6PJE2 187 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 TRIM46Q7Z4K8 759 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 TGIF2LYQ8IUE0 185 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 ZFP28Q8NHY6 868 aa12.44□□□□□ -0.42
GGA3-208ENST00000579743 KCNA7Q96RP8 456 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms