RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 PSME2Q9UL46 239 aa8.72□□□□□ -1.01
NPLOC4-219ENST00000576713 G3BP2Q9UN86 482 aaKnown RBP8.72□□□□□ -1.01
NPLOC4-219ENST00000576713 ENTPD4Q9Y227 616 aa8.72□□□□□ -1.01
NPLOC4-219ENST00000576713 WBP11Q9Y2W2 641 aaKnown RBP8.72□□□□□ -1.01
NPLOC4-219ENST00000576713 GPR45Q9Y5Y3 372 aa8.72□□□□□ -1.01
NPLOC4-219ENST00000576713 USH1CQ9Y6N9 552 aa8.72□□□□□ -1.01
NPLOC4-219ENST00000576713 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 DYTNA2CJ06 578 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 SYNDIG1LA6NDD5 238 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 C17orf51A8MQB3 221 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 B2RBV5 119 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 TCP11X1B4DZS4 312 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 PDPK1O15530 556 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 ZNHIT1O43257 154 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 PRAMEF2O60811 474 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 EDF1O60869 148 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 SCN2BO60939 215 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 SP1P08047 785 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CT45A8P0DMV1 189 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CT45A9P0DMV2 189 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CCL3P10147 92 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 PRPS2P11908 318 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 LBPP18428 481 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 MST1P26927 711 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 RFC3P40938 356 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 SSR4P51571 173 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CLDN8P56748 225 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 C21orf58P58505 322 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 GPR85P60893 370 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 AP2B1P63010 937 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 SMU1Q2TAY7 513 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 ZNF791Q3KP31 576 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 LSM12Q3MHD2 195 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CT45A2Q5DJT8 189 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 ZNF766Q5HY98 468 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 BICRALQ6AI39 1079 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 GALNTL5Q7Z4T8 443 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 HPS6Q86YV9 775 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 FAM9CQ8IZT9 166 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CYP4Z2PQ8N1L4 340 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CLEC4FQ8N1N0 589 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 OR2L13Q8N349 312 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 OR7G1Q8NGA0 311 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 OR4N2Q8NGD1 307 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 DYDC1Q8WWB3 177 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 TM9SF4Q92544 642 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 MIB2Q96AX9 1013 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 COQ8BQ96D53 544 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 ELP4Q96EB1 424 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 GIMAP5Q96F15 307 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 OTUB1Q96FW1 271 aaPredicted RBP8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 VSTM2LQ96N03 204 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 CXorf36Q9H7Y0 433 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 FOLH1BQ9HBA9 442 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 PROK2Q9HC23 129 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 SH2D2AQ9NP31 389 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 BCAP29Q9UHQ4 241 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 TEKT2Q9UIF3 430 aa8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 EIF3LQ9Y262 564 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 YARS2Q9Y2Z4 477 aaKnown RBP8.71□□□□□ -1.02
NPLOC4-219ENST00000576713 TRAV17A0A0B4J275 112 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 C2orf92A0A1B0GVN3 265 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 OR6C76A6NM76 312 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 B4DXG7 233 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 PLOD2O00469 737 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 ADAM10O14672 748 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 SHOXO15266 292 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 NME2P1O60361 137 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 PLOD3O60568 738 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 DIAPH2O60879 1101 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC25A12O75746 678 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 C6orf47O95873 294 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 MPIP34949 423 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 HPCAL1P37235 193 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 ASMTP46597 345 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 UQCRFS1P47985 274 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 CYB561P49447 251 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 DGKQP52824 942 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 GYS2P54840 703 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 AQP5P55064 265 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 FBXW4P57775 412 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 SF3A3Q12874 501 aaKnown RBP eCLIP8.7□□□□□ -1.022e-8■■■■□ 20.1
NPLOC4-219ENST00000576713 SPANXN4Q5MJ08 99 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 ZNF324BQ6AW86 544 aaPredicted RBP8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 OR4F3Q6IEY1 312 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 SLC29A4Q7RTT9 530 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 CAMKMTQ7Z624 323 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 TMEM156Q8N614 296 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 CPSF7Q8N684 471 aaKnown RBP8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 OR10G3Q8NGC4 313 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 OR5M3Q8NGP4 307 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 OR9I1Q8NGQ6 314 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 FBXO30Q8TB52 745 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 ACTRT2Q8TDY3 377 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 GRHL3Q8TE85 626 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 MTERF3Q96E29 417 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 C16orf58Q96GQ5 468 aa8.7□□□□□ -1.02
NPLOC4-219ENST00000576713 ART5Q96L15 291 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms