RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 LRRC18Q8N456 261 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 OR2T29Q8NH02 315 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 RPLP0P6Q8NHW5 317 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 CD99L2Q8TCZ2 262 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 ARNTL2Q8WYA1 636 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 ACSF2Q96CM8 615 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MTERF1Q99551 399 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 ADAM19Q9H013 955 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 OR52A5Q9H2C5 316 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 ZMYM5Q9UJ78 669 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 UBQLN1Q9UMX0 589 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 EXO1Q9UQ84 846 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 GSTK1Q9Y2Q3 226 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 MRPS18CQ9Y3D5 142 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 CHD5Q8TDI0 1954 aa7.53□□□□□ -1.2
TOM1L1-220ENST00000575333 TMEM200CA6NKL6 621 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 AGAP14A8MT82 685 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 GTPBP1O00178 669 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 MAN2B1O00754 1011 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 LDLRAD4O15165 306 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SURF4O15260 269 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC16A4O15374 487 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 CHST10O43529 356 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 OR10H2O60403 315 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SEMA7AO75326 666 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 DDNO94850 711 aaPredicted RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 GLP2RO95838 553 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 HIST1H2ABP04908 130 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 PSAPP07602 524 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 ELNP15502 786 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 RPA2P15927 270 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 MGMTP16455 207 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 FEN1P39748 380 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 BDKRB1P46663 353 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 STK19P49842 368 aaPredicted RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 CCR4P51679 360 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 POLR2JP52435 117 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 HSD11B2P80365 405 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SORDQ00796 357 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 ASPRV1Q53RT3 343 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 DCAF10Q5QP82 559 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 HIST2H3PS2Q5TEC6 136 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 TDRD10Q5VZ19 366 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC22A10Q63ZE4 541 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 PLAG1Q6DJT9 500 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 LPCAT3Q6P1A2 487 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 PRSS55Q6UWB4 352 aaPredicted RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC36A4Q6YBV0 504 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 DEF8Q6ZN54 512 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 HIST3H2AQ7L7L0 130 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 RANBP3LQ86VV4 465 aaPredicted RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 CEP97Q8IW35 865 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 PQLC3Q8N755 202 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 ZNF548Q8NEK5 533 aaPredicted RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 TMEM185AQ8NFB2 350 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 MRGPRDQ8TDS7 321 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 TNFRSF14Q92956 283 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 HIST1H2ACQ93077 130 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 MARS2Q96GW9 593 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 PTCHD1Q96NR3 888 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 TMEM47Q9BQJ4 181 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 ARL6Q9H0F7 186 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SEPSECSQ9HD40 501 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 EXOSC3Q9NQT5 275 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 AIG1Q9NVV5 245 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC17A6Q9P2U8 582 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 FBXL3Q9UKT7 428 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SAMD4AQ9UPU9 718 aaKnown RBP7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 SLC35A3Q9Y2D2 325 aa7.52□□□□□ -1.2
TOM1L1-220ENST00000575333 COL11A2P13942 1736 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 ELOA3CA0A087WX78 387 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 A0A1B0GUH1 482 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 ELOVL7A1L3X0 281 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 CXorf65A6NEN9 183 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 B4E171 279 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 SEC14L6B5MCN3 397 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 GFYI3L273 518 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 CXCR6O00574 342 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 TPST2O60704 377 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 CTNSO60931 367 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 FZD7O75084 574 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 ANXA9O76027 345 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 AP2A2O94973 939 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 OR2A4O95047 310 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 CNOT4O95628 575 aaKnown RBP7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 TRUB2O95900 331 aaKnown RBP7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 SLC35E2BP0CK96 405 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 C6P13671 934 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 BMP7P18075 431 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 POU3F2P20265 443 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 MGAT1P26572 445 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 RBMS1P29558 406 aaKnown RBP7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 SSTR4P31391 388 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 BTCP35070 178 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 AHRP35869 848 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 CDK8P49336 464 aa7.52□□□□□ -1.21
TOM1L1-220ENST00000575333 ZP1P60852 638 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms