RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SHCBP1LQ9BZQ2 653 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 TSPYL1Q9H0U9 437 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 CDC42EP4Q9H3Q1 356 aaKnown RBP9.46□□□□□ -0.9
TVP23B-208ENST00000575261 SENP1Q9P0U3 644 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 HEY2Q9UBP5 337 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 NFU1Q9UMS0 254 aa9.46□□□□□ -0.9
TVP23B-208ENST00000575261 SLC22A20A6NK97 555 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ARHGEF9O43307 516 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 SMNDC1O75940 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 OR4F21O95013 312 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 TGM6O95932 706 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 EVI2BP34910 448 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 PNLIPRP2P54317 469 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 DSCR4P56555 118 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 CLCQ05315 142 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF155Q12901 538 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 GANABQ14697 944 aaKnown RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 HEPACAMQ14CZ8 416 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 SPIN4Q56A73 249 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 TCHHL1Q5QJ38 904 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 RAET1LQ5VY80 246 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 OR5M10Q6IEU7 315 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 CLEC9AQ6UXN8 241 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 CXorf67Q86X51 503 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 CCDC116Q8IYX3 515 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 LRRC75A-AS1Q8N1F1 130 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 CDYL2Q8N8U2 506 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 CNEP1R1Q8N9A8 125 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF592Q92610 1267 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 KAT2AQ92830 837 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 EFHD2Q96C19 240 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 MTBPQ96DY7 904 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF382Q96SR6 550 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 FMO2Q99518 471 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 MED18Q9BUE0 208 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 STMN4Q9H169 189 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ANKRA2Q9H9E1 313 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 FOLH1BQ9HBA9 442 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF226Q9NYT6 803 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 TAS2R9Q9NYW1 312 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 PPP4R1LQ9P1A2 415 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF180Q9UJW8 692 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ZNF225Q9UK10 706 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 ABCG2Q9UNQ0 655 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 OR10H1Q9Y4A9 318 aa9.45□□□□□ -0.9
TVP23B-208ENST00000575261 TLN2Q9Y4G6 2542 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 TRIM49D1C9J1S8 452 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 POC1B-GALNT4F8VUJ3 575 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 MANBAO00462 879 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 CTIFO43310 598 aaKnown RBP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 PLOD3O60568 738 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 SMPD2O60906 423 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 COQ9O75208 318 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 ULK1O75385 1050 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 NME6O75414 186 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 SUPT7LO94864 414 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 HEXAP06865 529 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 SBK3P0C264 359 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 PEPDP12955 493 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 TAC1P20366 129 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 HMOX2P30519 316 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 TIA1P31483 386 aaKnown RBP eCLIP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 CCKARP32238 428 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 MPIP34949 423 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 HSD17B3P37058 310 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 CD79BP40259 229 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 GSTM5P46439 218 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 GAS1P54826 345 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 EEFSECP57772 596 aaKnown RBP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 B3GALT5-AS1P59052 145 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 ACSM2AQ08AH3 577 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 FAM27E3Q08E93 113 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 Q5PR19 223 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 FAM219BQ5XKK7 198 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 ACSM2BQ68CK6 577 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 VWA1Q6PCB0 445 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 GPRIN3Q6ZVF9 776 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 Q71RC1 249 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 P3H2Q8IVL5 708 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 SLC44A2Q8IWA5 706 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 UBQLNLQ8IYU4 475 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 FAM9CQ8IZT9 166 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 MEIOBQ8N635 442 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 FADS6Q8N9I5 356 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 PIGTQ969N2 578 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 STARD4Q96DR4 205 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 FAM111AQ96PZ2 611 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 TMEM237Q96Q45 408 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 PIP5K1AQ99755 562 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 ACPTQ9BZG2 426 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 SLC35C2Q9NQQ7 365 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 KLHL28Q9NXS3 571 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 C6orf203Q9P0P8 240 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-208ENST00000575261 STK38LQ9Y2H1 464 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 JMJD1CQ15652 2540 aa9.44□□□□□ -0.9
TVP23B-208ENST00000575261 FN1P02751 2386 aaKnown RBP9.43□□□□□ -0.9
TVP23B-208ENST00000575261 CCDC151A5D8V7 595 aa9.43□□□□□ -0.9
TVP23B-208ENST00000575261 DEFB108AA8MXU0 73 aa9.43□□□□□ -0.9
TVP23B-208ENST00000575261 B4DXG7 233 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms