RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 DOCK7Q96N67 2140 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 A0A1W2PPM1 405 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 UBFD1O14562 309 aaKnown RBP19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 IL18BPO95998 194 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 JUNP05412 331 aaKnown RBP19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 DDCP20711 480 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 GRK2P25098 689 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 PSPHP78330 225 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 CFAP157Q5JU67 520 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 AAGABQ6PD74 315 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 ZYG11AQ6WRX3 759 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 CDC20BQ86Y33 519 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 OR4K17Q8NGC6 315 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 OR4N2Q8NGD1 307 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 MZB1Q8WU39 189 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 NINJ1Q92982 152 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 C11orf24Q96F05 449 aaPredicted RBP19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 TXLNGYQ9BZA5 131 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 STMN4Q9H169 189 aaPredicted RBP19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 MIEF1Q9NQG6 463 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 PLEKHA6Q9Y2H5 1048 aa19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 RPH3AQ9Y2J0 694 aaPredicted RBP19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 POLR3HQ9Y535 204 aaPredicted RBP19.19■□□□□ 0.66
CHRNB1-206ENST00000574054 MPDZO75970 2070 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 PRRC2AP48634 2157 aaKnown RBP19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 SERTM1A2A2V5 107 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 CLCA1A8K7I4 914 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 G3V2L1 256 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 SCO2O43819 266 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 COQ9O75208 318 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 GLRA3O75311 464 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 NTSP30990 170 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 MC3RP41968 323 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 LHX2P50458 406 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 GFRA1P56159 465 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 MRPS22P82650 360 aaKnown RBP19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 FOXF2Q12947 444 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 CEBPEQ15744 281 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 TMEM107Q6UX40 140 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 LINC01560Q8TB33 94 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 INTS12Q96CB8 462 aaKnown RBP19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 TM9SF2Q99805 663 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 SFXN3Q9BWM7 321 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 SHCBP1LQ9BZQ2 653 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 SIRT5Q9NXA8 310 aa19.18■□□□□ 0.66
CHRNB1-206ENST00000574054 FAM221AA4D161 298 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 C17orf51A8MQB3 221 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 MYO1GB0I1T2 1018 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 PLOD2O00469 737 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 PROCP04070 461 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 EPXP11678 715 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 DNASE1P24855 282 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 DPP4P27487 766 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 CPA2P48052 419 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 PNLIPRP2P54317 469 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 PRSS53Q2L4Q9 553 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 FRMD7Q6ZUT3 714 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 LUZP2Q86TE4 346 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 GRAMD2AQ8IUY3 354 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 GCNT2Q8N0V5 402 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 CNPY4Q8N129 248 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 CCDC63Q8NA47 563 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 WNT2BQ93097 391 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 ZFP3Q96NJ6 502 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 FOXC2Q99958 501 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 RBM24Q9BX46 236 aaKnown RBP19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 PPP4R1LQ9P1A2 415 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 EDARQ9UNE0 448 aa19.17■□□□□ 0.66
CHRNB1-206ENST00000574054 SMIM23A6NLE4 172 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 RCBTB2O95199 551 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 EVI2BP34910 448 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 GAS1P54826 345 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 SORDQ00796 357 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 STX5Q13190 355 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 DAZAP2Q15038 168 aaPredicted RBP19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 FAM71E1Q6IPT2 247 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 G6PC3Q9BUM1 346 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 MYNNQ9NPC7 610 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 DDX18Q9NVP1 670 aaKnown RBP19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 JKAMPQ9P055 326 aa19.16■□□□□ 0.66
CHRNB1-206ENST00000574054 A0A087WV62 115 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 NAA20P61599 178 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 PSG6Q00889 435 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 ADGRE4PQ86SQ3 457 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 CHDHQ8NE62 594 aaPredicted RBP19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 RNF138Q8WVD3 245 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 UBLCP1Q8WVY7 318 aaPredicted RBP19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 YIPF4Q9BSR8 244 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 ACBD3Q9H3P7 528 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 DSN1Q9H410 356 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 GLIPR2Q9H4G4 154 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 TNFRSF12AQ9NP84 129 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 RRAGDQ9NQL2 400 aaPredicted RBP19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 GALNT8Q9NY28 637 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 CLCF1Q9UBD9 225 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 GRID1Q9ULK0 1009 aa19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 C19orf53Q9UNZ5 99 aaPredicted RBP19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 NIPBLQ6KC79 2804 aaeCLIP19.15■□□□□ 0.66
CHRNB1-206ENST00000574054 H3BQF6 201 aa19.14■□□□□ 0.65
CHRNB1-206ENST00000574054 ZIC3O60481 467 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms