RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ANGPTL8Q6UXH0 198 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 MEX3BQ6ZN04 569 aaKnown RBP15.77■□□□□ 0.12
SMG6-212ENST00000573153 DMRTC2Q8IXT2 367 aaPredicted RBP15.77■□□□□ 0.12
SMG6-212ENST00000573153 OR2L13Q8N349 312 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 FAM83FQ8NEG4 500 aaPredicted RBP15.77■□□□□ 0.12
SMG6-212ENST00000573153 TWIST2Q8WVJ9 160 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 WDYHV1Q96HA8 205 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 AMDHD1Q96NU7 426 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 G6PC3Q9BUM1 346 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 OR2B2Q9GZK3 357 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 PRAMEF25A6NGN4 478 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 JUNP05412 331 aaKnown RBP15.76■□□□□ 0.11
SMG6-212ENST00000573153 LINC00032P0C843 101 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 GABRA1P14867 456 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 MAP3K8P41279 467 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 FRKP42685 505 aaPredicted RBP15.76■□□□□ 0.11
SMG6-212ENST00000573153 NCBP2P52298 156 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMG6-212ENST00000573153 KRT71Q3SY84 523 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 RFTN2Q52LD8 501 aaPredicted RBP15.76■□□□□ 0.11
SMG6-212ENST00000573153 CDC26Q8NHZ8 85 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 MTERF3Q96E29 417 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 COL21A1Q96P44 957 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 FLRT3Q9NZU0 649 aa15.76■□□□□ 0.11
SMG6-212ENST00000573153 INTS1Q8N201 2190 aaKnown RBP15.76■□□□□ 0.11
SMG6-212ENST00000573153 RGS16O15492 202 aaPredicted RBP15.75■□□□□ 0.11
SMG6-212ENST00000573153 EPPINO95925 133 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ASMTP46597 345 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ZFP36L2P47974 494 aaKnown RBP15.75■□□□□ 0.11
SMG6-212ENST00000573153 PNLIPRP2P54317 469 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 GFRA1P56159 465 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 EFR3AQ14156 821 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 EXOSC6Q5RKV6 272 aaKnown RBP15.75■□□□□ 0.11
SMG6-212ENST00000573153 SH2D4BQ5SQS7 431 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ANKRD26P1Q6NSI1 321 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 TMEM107Q6UX40 140 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ZCCHC23Q6ZST2 131 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ADGRE4PQ86SQ3 457 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 YRDCQ86U90 279 aaKnown RBP15.75■□□□□ 0.11
SMG6-212ENST00000573153 TNIP2Q8NFZ5 429 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 TMCO6Q96DC7 493 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ELP4Q96EB1 424 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ADOQ96SZ5 270 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 REEP4Q9H6H4 257 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 METTL7AQ9H8H3 244 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 SERHLQ9NQF3 203 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 NTMQ9P121 344 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 FBXL2Q9UKC9 423 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 MAPRE3Q9UPY8 281 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 WIF1Q9Y5W5 379 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 ACTL7BQ9Y614 415 aa15.75■□□□□ 0.11
SMG6-212ENST00000573153 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 C15orf38-AP3S2A0A0A6YYH1 394 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 TTC36A6NLP5 189 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 PIP5K1BO14986 540 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 TM9SF1O15321 606 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 BIRC5O15392 142 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 CTIFO43310 598 aaKnown RBP15.74■□□□□ 0.11
SMG6-212ENST00000573153 FADS1O60427 444 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 DHRS4L1P0CG22 281 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 BCKDHAP12694 445 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 CYP4B1P13584 511 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 SSTR2P30874 369 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 SERPINB4P48594 390 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 MASP1P48740 699 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 ZNF136P52737 540 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 RPL38P63173 70 aaKnown RBP15.74■□□□□ 0.11
SMG6-212ENST00000573153 CYP27C1Q4G0S4 372 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 WDR53Q7Z5U6 358 aaPredicted RBP15.74■□□□□ 0.11
SMG6-212ENST00000573153 CROCCP2Q86T23 111 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 EXOC3L1Q86VI1 746 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 OR1J4Q8NGS1 313 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 GIMAP5Q96F15 307 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 PGM2Q96G03 612 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 PPP3R2Q96LZ3 170 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 SH3GL2Q99962 352 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 LMF2Q9BU23 707 aaKnown RBP15.74■□□□□ 0.11
SMG6-212ENST00000573153 RUBCNLQ9H714 662 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 EXO5Q9H790 373 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 ACSS1Q9NUB1 689 aaPredicted RBP15.74■□□□□ 0.11
SMG6-212ENST00000573153 GIMAP2Q9UG22 337 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 FIS1Q9Y3D6 152 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 L3MBTL1Q9Y468 752 aa15.74■□□□□ 0.11
SMG6-212ENST00000573153 MBD3L4A6NDZ8 208 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 MBD3L3A6NE82 208 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 MBD3L5A6NJ08 208 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 AHRRA9YTQ3 701 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 PDPK1O15530 556 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 REM1O75628 298 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 TRAPPC6AO75865 159 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 SNUPNO95149 360 aaKnown RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 IGKV1D-16P01601 117 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 TIMP3P35625 211 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 B3GALT5-AS1P59052 145 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 MRPS22P82650 360 aaKnown RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 NSUN5P2Q63ZY6 315 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 LRIG3Q6UXM1 1119 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 ZNF551Q7Z340 670 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 SLC44A2Q8IWA5 706 aaPredicted RBP15.73■□□□□ 0.11
SMG6-212ENST00000573153 DDIASQ8IXT1 998 aa15.73■□□□□ 0.11
SMG6-212ENST00000573153 LIX1Q8N485 282 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms