RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CAPN3P20807 821 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 PTPN6P29350 595 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 S100A3P33764 101 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 GABRA3P34903 492 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 SOAT1P35610 550 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 RPL3P39023 403 aaKnown RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 CASP3P42574 277 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CCT3P49368 545 aaKnown RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 MRPL19P49406 292 aaKnown RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 MAN2A2P49641 1150 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 GAS1P54826 345 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 DCAF7P61962 342 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 FUT5Q11128 374 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TP53BP2Q13625 1128 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 RPS6KA2Q15349 733 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 INAQ16352 499 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 EIF2S3LQ2VIR3 472 aaKnown RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 CMPK2Q5EBM0 449 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CCNJQ5T5M9 372 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 SLC22A10Q63ZE4 541 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 APOOLQ6UXV4 268 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 DNAJC14Q6Y2X3 702 aaPredicted RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ACAD11Q709F0 780 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TAGAPQ8N103 731 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TMEM251Q8N6I4 163 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ZFP62Q8NB50 900 aaPredicted RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 OR4A15Q8NGL6 344 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 FAM110BQ8TC76 370 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 DIO2Q92813 273 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CDS1Q92903 461 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TMEM125Q96AQ2 219 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 VPS33AQ96AX1 596 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 HSPBAP1Q96EW2 488 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 RMND5BQ96G75 393 aaPredicted RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 SLC35A4Q96G79 324 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 SGCZQ96LD1 299 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CCDC115Q96NT0 180 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 MS4A4EQ96PG1 132 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TMEM120AQ9BXJ8 343 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 TTTY12Q9BZ98 90 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 SACM1LQ9NTJ5 587 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ZCCHC3Q9NUD5 404 aaKnown RBP6.4□□□□□ -1.38
SMG6-209ENST00000571442 TAS2R9Q9NYW1 312 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 ZIM2Q9NZV7 527 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 SLAMF8Q9P0V8 285 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 NPIPA1Q9UND3 350 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 CFL2Q9Y281 166 aa6.4□□□□□ -1.38
SMG6-209ENST00000571442 HIVEP3Q5T1R4 2406 aa6.4□□□□□ -1.39
SMG6-209ENST00000571442 POLEQ07864 2286 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 KIAA1549Q9HCM3 1950 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 PRRC2CQ9Y520 2896 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 A0A0G2JND7 137 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 CENPVL1A0A0U1RR11 272 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 RNF103-CHMP3A0A140T963 221 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 PRSS51A0A1B0GVH4 220 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 OR6C70A6NIJ9 312 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GNB5O14775 395 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 REM1O75628 298 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SLC22A3O75751 556 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 PDE9AO76083 593 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 KCNK2O95069 426 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 UNC5CO95185 931 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 P04436 131 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 IDO1P14902 403 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 NAGAP17050 411 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 ENDOUP21128 410 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 MAGEA5P43359 124 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 RFX3P48380 749 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 MVDP53602 400 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SEC24CP53992 1094 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 CLNS1AP54105 237 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 NRG3P56975 720 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 MRPS22P82650 360 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 ALDH6A1Q02252 535 aaKnown RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 MAPK11Q15759 364 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GSTA3Q16772 222 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GRAMD1BQ3KR37 738 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 TIGD2Q4W5G0 525 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 HSP90B2PQ58FF3 399 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 PAGE3Q5JUK9 113 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 COX20Q5RI15 118 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SAXO2Q658L1 398 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 CDC73Q6P1J9 531 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SLC2A7Q6PXP3 512 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 NCCRP1Q6ZVX7 275 aaPredicted RBP6.39□□□□□ -1.39
SMG6-209ENST00000571442 C6orf120Q7Z4R8 191 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 SPPL2CQ8IUH8 684 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 MSRB3Q8IXL7 192 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 C10orf111Q8N326 155 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 ARFGAP2Q8N6H7 521 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 HORMAD2Q8N7B1 307 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 CDRT4Q8N9R6 151 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 WDSUB1Q8N9V3 476 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 GALNT11Q8NCW6 608 aa6.39□□□□□ -1.39
SMG6-209ENST00000571442 ST6GALNAC3Q8NDV1 305 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms