RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SGPP1Q9BX95 441 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 MS4A8Q9BY19 250 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 NXF2Q9GZY0 626 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 MKRN2Q9H000 416 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 CCDC86Q9H6F5 360 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 MBNL1Q9NR56 388 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 DPP7Q9UHL4 492 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 GRIP1Q9Y3R0 1128 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 C4orf51C9J302 202 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 MRPS14O60783 128 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 YES1P07947 543 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SAGP10523 405 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 CLUP10909 449 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 GRPRP30550 384 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SSTR2P30874 369 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 EVI2BP34910 448 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 GCGRP47871 477 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 LIMS1P48059 325 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 MLLT11Q13015 90 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SRSF5Q13243 272 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 PDE7AQ13946 482 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 GXYLT1Q4G148 440 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 OR4E2Q8NGC2 313 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SUSD6Q92537 303 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SLC25A19Q9HC21 320 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 NEUROD4Q9HD90 331 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 ATP13A2Q9NQ11 1180 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SLC35C2Q9NQQ7 365 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 LSM2Q9Y333 95 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 CENPVL1A0A0U1RR11 272 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 TEX46H3BTG2 121 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 J3QLW9 94 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 FOXE1O00358 373 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 POLR1CO15160 346 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 PRKNO60260 465 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 CD3GP09693 182 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 PRKAR1AP10644 381 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 ZNF19P17023 458 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 NOS3P29474 1203 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 UQCRC1P31930 480 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SNRPNP63162 240 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 FIGNL1Q6PIW4 674 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 SLC36A4Q6YBV0 504 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 CAMKMTQ7Z624 323 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 KLHDC8AQ8IYD2 350 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 LINC01555Q8NAE3 123 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 UPRTQ96BW1 309 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 LMLNQ96KR4 655 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 AMDHD1Q96NU7 426 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 MCHR1Q99705 422 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 USP36Q9P275 1121 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 ITGB1BP2Q9UKP3 347 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 PPIL1Q9Y3C6 166 aa8.42□□□□□ -1.06
HDGFL3-206ENST00000568294 A0A1W2PP55 124 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 FAM172BPA6NC97 362 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 GTPBP1O00178 669 aaKnown RBP8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 GABRPO00591 440 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 MID1O15344 667 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 LYRM1O43325 122 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 PRNPP04156 253 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 ALPPP05187 535 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 PRKCAP17252 672 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 DRD5P21918 477 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 SLC1A3P43003 542 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 PCDH1Q08174 1060 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 TGM3Q08188 693 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 COX10Q12887 443 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 NOGQ13253 232 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 SLC9A5Q14940 896 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 OR4C11Q6IEV9 310 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 CNKSR3Q6P9H4 555 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 GET4Q7L5D6 327 aaPredicted RBP8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 CPA6Q8N4T0 437 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 ADAMTS15Q8TE58 950 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 DEDD2Q8WXF8 326 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 CXorf40BQ96DE9 158 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 ZNF559Q9BR84 538 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 CHIAQ9BZP6 476 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 LHX9Q9NQ69 397 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 SPHK1Q9NYA1 384 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 DEC1Q9P2X7 70 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 FBXL4Q9UKA2 621 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 SLC7A7Q9UM01 511 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 MAPRE3Q9UPY8 281 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 MAU2Q9Y6X3 613 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 HELZP42694 1942 aaKnown RBP8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 A0A1W2PQ72 361 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 A0A1W2PR48 441 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 FAM171A2A8MVW0 826 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 SPINT1O43278 529 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 LANCL1O43813 399 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 AIFM1O95831 613 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 PTPN2P17706 415 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 SHC1P29353 583 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 BCL6P41182 706 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 PDX1P52945 283 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 EFR3AQ14156 821 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 ZNF234Q14588 700 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 NDUFA5Q16718 116 aa8.41□□□□□ -1.06
HDGFL3-206ENST00000568294 DEFB115Q30KQ5 88 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms