RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 BCAS2O75934 225 aaPredicted RBP12.39□□□□□ -0.43
CLK3-218ENST00000566926 P04436 131 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 ZCCHC18P0CG32 403 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 LAMP1P11279 417 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 ZNF24P17028 368 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 MST1P26927 711 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 MPIP34949 423 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 MEOX1P50221 254 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 NRG3P56975 720 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.43
CLK3-218ENST00000566926 MLC1Q15049 377 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 EBPQ15125 230 aaKnown RBP12.39□□□□□ -0.43
CLK3-218ENST00000566926 PRICKLE4Q2TBC4 344 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 PAGE3Q5JUK9 113 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 PGM2L1Q6PCE3 622 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 SLC2A7Q6PXP3 512 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 DLEU7Q6UYE1 221 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 TICAM1Q8IUC6 712 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 SULF2Q8IWU5 870 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 TNIP2Q8NFZ5 429 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 OR7A2PQ8NGA2 310 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 ZFP28Q8NHY6 868 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 ZBED6CLQ96FA7 236 aaPredicted RBP12.39□□□□□ -0.43
CLK3-218ENST00000566926 GPR137Q96N19 417 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 PANX1Q96RD7 426 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 CGREF1Q99674 301 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 OR10A5Q9H207 317 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 MUC13Q9H3R2 512 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 SACM1LQ9NTJ5 587 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 ACSS1Q9NUB1 689 aaPredicted RBP12.39□□□□□ -0.43
CLK3-218ENST00000566926 TMEM181Q9P2C4 612 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 OSGIN2Q9Y236 505 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 RELNP78509 3460 aa12.39□□□□□ -0.43
CLK3-218ENST00000566926 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 ANKRD65E5RJM6 399 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 ACOT7O00154 380 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 TFECO14948 347 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 SCN2BO60939 215 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 ANP32DO95626 131 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 STAMBPO95630 424 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 STSP08842 583 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 CD1EP15812 388 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 CNR1P21554 472 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 NTSP30990 170 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 SSTR4P31391 388 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 TMED10P49755 219 aaKnown RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 CASP6P55212 293 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 C4orf17Q53FE4 359 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 OR4F3Q6IEY1 312 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 MDGA2Q7Z553 956 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 NET1Q7Z628 596 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 MMP21Q8N119 569 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 GHDCQ8N2G8 530 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 ZFP62Q8NB50 900 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 C17orf47Q8NEP4 570 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 GOT1L1Q8NHS2 421 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 C16orf52Q8NHV5 167 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 ZNF675Q8TD23 568 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 DOK4Q8TEW6 326 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 EXOSC8Q96B26 276 aaKnown RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 SPACA9Q96E40 222 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 CNRIP1Q96F85 164 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 ZNF681Q96N22 645 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 BBS4Q96RK4 519 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 CDRT15Q96T59 188 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 SERHLQ9NQF3 203 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 SLC35C2Q9NQQ7 365 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 PRODH2Q9UF12 536 aa12.38□□□□□ -0.43
CLK3-218ENST00000566926 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 EXO1Q9UQ84 846 aaKnown RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
CLK3-218ENST00000566926 A0A1W2PS29 197 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 EVPLLA8MZ36 301 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 NPIPA5E9PKD4 350 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 TP53I11O14683 189 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 PDPK1O15530 556 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 ASNA1O43681 348 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 SEMA7AO75326 666 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 SLITRK5O94991 958 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 CT62P0C5K7 136 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 HSD17B1P14061 328 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 ME2P23368 584 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 SLC6A2P23975 617 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 FRKP42685 505 aaPredicted RBP12.37□□□□□ -0.43
CLK3-218ENST00000566926 MAGEA8P43361 318 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 NR0B1P51843 470 aaKnown RBP12.37□□□□□ -0.43
CLK3-218ENST00000566926 SLC7A2P52569 658 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 WNT3P56703 355 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 EEFSECP57772 596 aaKnown RBP12.37□□□□□ -0.43
CLK3-218ENST00000566926 DCAF7P61962 342 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 RPP38P78345 283 aaKnown RBP12.37□□□□□ -0.43
CLK3-218ENST00000566926 PHC1P78364 1004 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 PLGLB1Q02325 96 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 BNIP2Q12982 314 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 ZNF750Q32MQ0 723 aa12.37□□□□□ -0.43
CLK3-218ENST00000566926 ZNF791Q3KP31 576 aaPredicted RBP12.37□□□□□ -0.43
CLK3-218ENST00000566926 SLC22A10Q63ZE4 541 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms