RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 LIN37Q96GY3 246 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 WFDC6Q9BQY6 131 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 WDR45Q9Y484 360 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 PCDHGA8Q9Y5G5 932 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 MAGED1Q9Y5V3 778 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 U3KQV3 271 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 CENPVL1A0A0U1RR11 272 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 GNGT2O14610 69 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 EPPINO95925 133 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 SLC37A1P57057 533 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 POU6F2P78424 691 aaPredicted RBP16.42■□□□□ 0.22
HERC2-208ENST00000566635 DCAF12Q5T6F0 453 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 FAM198BQ6UWH4 519 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ZBTB49Q6ZSB9 765 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 PIWIL3Q7Z3Z3 882 aaKnown RBP16.42■□□□□ 0.22
HERC2-208ENST00000566635 TMEM179BQ7Z7N9 219 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 VRK2Q86Y07 508 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ZNF721Q8TF20 911 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ZNF350Q9GZX5 532 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 SLC26A1Q9H2B4 701 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 NDUFAF4Q9P032 175 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 BAG5Q9UL15 447 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 SATB2Q9UPW6 733 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ZFHX2Q9C0A1 2572 aaPredicted RBP16.42■□□□□ 0.22
HERC2-208ENST00000566635 NPIPA5A0A0B4J1W7 369 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 PCNX2A6NKB5 2137 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 NPIPA7E9PJI5 369 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ALOX12BO75342 701 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 IGKV3-11P04433 115 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ALPPP05187 535 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 NPIPA8P0DM63 369 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 YAP1P46937 504 aaKnown RBP16.42■□□□□ 0.22
HERC2-208ENST00000566635 RFX3P48380 749 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 RAB15P59190 212 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ZNHIT3Q15649 155 aaPredicted RBP16.42■□□□□ 0.22
HERC2-208ENST00000566635 TBPL2Q6SJ96 375 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ANKRD37Q7Z713 158 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 ZAR1Q86SH2 424 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 GLRX5Q86SX6 157 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 HS3ST5Q8IZT8 346 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 OR7G1Q8NGA0 311 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 OR4D11Q8NGI4 311 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 OR14A16Q8NHC5 309 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 VANGL1Q8TAA9 524 aaPredicted RBP16.42■□□□□ 0.22
HERC2-208ENST00000566635 FKBP10Q96AY3 582 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 NUDT9Q9BW91 350 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 AMBRA1Q9C0C7 1298 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 IRF2BPLQ9H1B7 796 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 C3orf18Q9UK00 162 aa16.42■□□□□ 0.22
HERC2-208ENST00000566635 SPAARA0A1B0GVQ0 90 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 TMX2-CTNND1H3BSU7 103 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 J3KTA2 159 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 DYRK3O43781 588 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 KCNK2O95069 426 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 JMJD7P0C870 316 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 PABPC4LP0CB38 370 aaKnown RBP16.41■□□□□ 0.22
HERC2-208ENST00000566635 CT45A8P0DMV1 189 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 CT45A9P0DMV2 189 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 SLC5A2P31639 672 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 TAF11Q15544 211 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 GPR68Q15743 365 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 CT45A2Q5DJT8 189 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 OR2T5Q6IEZ7 315 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 LACC1Q8IV20 430 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 OR2T29Q8NH02 315 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 PROX1Q92786 737 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 ZNF354BQ96LW1 612 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 LRFN5Q96NI6 719 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 DEPDC7Q96QD5 511 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 PHOX2BQ99453 314 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 CRB3Q9BUF7 120 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 LRRC42Q9Y546 428 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 PCDHGB3Q9Y5G1 929 aa16.41■□□□□ 0.22
HERC2-208ENST00000566635 M0R3H8 397 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 EI24O14681 340 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 ALBP02768 609 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 KLK3P07288 261 aaPredicted RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 EMP2P54851 167 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 ZNF311Q5JNZ3 666 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 CARM1Q86X55 608 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 RBM45Q8IUH3 476 aaKnown RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 RASSF5Q8WWW0 418 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 ZNF300Q96RE9 604 aaPredicted RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 C9orf16Q9BUW7 83 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 SPATA5L1Q9BVQ7 753 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 THSD1Q9NS62 852 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 PRODH2Q9UF12 536 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 NINQ8N4C6 2090 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 STX11O75558 287 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 STK17BO94768 372 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 IGKV1D-16P01601 117 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 RNF144AP50876 292 aaPredicted RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 LAPTM4AQ15012 233 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 OTUD3Q5T2D3 398 aaPredicted RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 ZSCAN1Q8NBB4 408 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 OR52P1PQ8NH57 321 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 DAZLQ92904 295 aaKnown RBP16.4■□□□□ 0.22
HERC2-208ENST00000566635 LMF1Q96S06 567 aa16.4■□□□□ 0.22
HERC2-208ENST00000566635 PINK1Q9BXM7 581 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms