RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 AP3M1Q9Y2T2 418 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 MAP1BP46821 2468 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 TRIM64CA6NLI5 447 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 EIF4E1BA6NMX2 242 aaKnown RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 NR5A2O00482 541 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 PRKNO60260 465 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 PRAMEF2O60811 474 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 SOX30O94993 753 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 TFAP2AP05549 437 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF23P17027 643 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 HOXB9P17482 250 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 UQCRC2P22695 453 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 TTKP33981 857 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 GPC1P35052 558 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 MC3RP41968 323 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 CDKN2CP42773 168 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 EEFSECP57772 596 aaKnown RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 DCAF7P61962 342 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 FXNQ16595 210 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 LRRC36Q1X8D7 754 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 KCTD21Q4G0X4 260 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 TIGD2Q4W5G0 525 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 MTX3Q5HYI7 312 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 PAGE3Q5JUK9 113 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 SLC2A7Q6PXP3 512 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 IGFL2Q6UWQ7 119 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 DLEU7Q6UYE1 221 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 GPR155Q7Z3F1 870 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 RETREG3Q86VR2 466 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 ANKRD46Q86W74 232 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 CARM1Q86X55 608 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 C9orf40Q8IXQ3 194 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 TNIP2Q8NFZ5 429 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 OR52R1Q8NGF1 315 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 OR5L2Q8NGL0 311 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 OR4A15Q8NGL6 344 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 DNAJB8Q8NHS0 232 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 SFXN5Q8TD22 340 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 LZICQ8WZA0 190 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 PANX1Q96RD7 426 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 INPP5KQ9BT40 448 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 C9orf16Q9BUW7 83 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 DEFB126Q9BYW3 111 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 PAIP1Q9H074 479 aaKnown RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF552Q9H707 407 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 ANKRA2Q9H9E1 313 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 TIMMDC1Q9NPL8 285 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 GPATCH2Q9NW75 528 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 MYOTQ9UBF9 498 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 COPS7AQ9UBW8 275 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 GPR55Q9Y2T6 319 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 HEMK1Q9Y5R4 338 aaPredicted RBP11.69□□□□□ -0.54
SF3B3-206ENST00000565990 ITPR1Q14643 2758 aa11.69□□□□□ -0.54
SF3B3-206ENST00000565990 TNRC6AQ8NDV7 1962 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 A0A096LPI6 279 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 TRBV5-3A0A0A0MS03 114 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 C2orf92A0A1B0GVN3 265 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 ANKRD33BA6NCL7 494 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 PRORSD1PA6NEY8 169 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 RFXANKO14593 260 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 ANGPT2O15123 496 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 ERN1O75460 977 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CPSF4O95639 269 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CT45A8P0DMV1 189 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CT45A9P0DMV2 189 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 SOX11P35716 441 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 PPICP45877 212 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CCL11P51671 97 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 MLF1P58340 268 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 PRR5P85299 388 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 EBPQ15125 230 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CT45A2Q5DJT8 189 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CRB2Q5IJ48 1285 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 C6orf10Q5SRN2 563 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 C6orf120Q7Z4R8 191 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 RPS19BP1Q86WX3 136 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 SLC15A4Q8N697 577 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 PAPD5Q8NDF8 572 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 NUP43Q8NFH3 380 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 FDCSPQ8NFU4 85 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 MIPOL1Q8TD10 442 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 BRIX1Q8TDN6 353 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 ADAMTS16Q8TE57 1224 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 CRELD1Q96HD1 420 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 VSTM2LQ96N03 204 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 SMAD5Q99717 465 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 LMF2Q9BU23 707 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 RBM38Q9H0Z9 239 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 SLC6A13Q9NSD5 602 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 STMN3Q9NZ72 180 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 SLAMF8Q9P0V8 285 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 LEF1Q9UJU2 399 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 PCDHB14Q9Y5E9 798 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 PCDHGA9Q9Y5G4 932 aaKnown RBP11.68□□□□□ -0.54
SF3B3-206ENST00000565990 NBEAQ8NFP9 2946 aa11.68□□□□□ -0.54
SF3B3-206ENST00000565990 TRBV11-1A0A0K0K1C0 115 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TRIM64A6NGJ6 449 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TTC36A6NLP5 189 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 TO15178 435 aa11.67□□□□□ -0.54
SF3B3-206ENST00000565990 COQ9O75208 318 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms