RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 TIGD3Q6B0B8 471 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 ANKRD26P1Q6NSI1 321 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 NPSR1Q6W5P4 371 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 NATD1Q8N6N6 113 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 CEP70Q8NHQ1 597 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 MARVELD3Q96A59 401 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 ELP4Q96EB1 424 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 NODALQ96S42 347 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 PRPF18Q99633 342 aaKnown RBP11.24□□□□□ -0.61
SPG7-211ENST00000565370 C1orf50Q9BV19 199 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 UBQLN3Q9H347 655 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 GALNT9Q9HCQ5 603 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 EQTNQ9NQ60 294 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 ACSS1Q9NUB1 689 aaPredicted RBP11.24□□□□□ -0.61
SPG7-211ENST00000565370 SPRR3Q9UBC9 169 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 ZDHHC2Q9UIJ5 367 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 CBLCQ9ULV8 474 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 ABCG2Q9UNQ0 655 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 EXO1Q9UQ84 846 aaKnown RBP11.24□□□□□ -0.61
SPG7-211ENST00000565370 EIF3LQ9Y262 564 aaKnown RBP11.24□□□□□ -0.61
SPG7-211ENST00000565370 RAP2CQ9Y3L5 183 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 CACNA1CQ13936 2221 aa11.24□□□□□ -0.61
SPG7-211ENST00000565370 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 ENO4A6NNW6 628 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 TSPAN2O60636 221 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 ICOSLGO75144 302 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 ENDOUP21128 410 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 PTPN6P29350 595 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 CLK3P49761 638 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 ABCE1P61221 599 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 PSG6Q00889 435 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 CYP27C1Q4G0S4 372 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 ZNF385BQ569K4 471 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 ZNF551Q7Z340 670 aaPredicted RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 CDRT4Q8N9R6 151 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 OR10Q1Q8NGQ4 319 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 OR6Y1Q8NGX8 325 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 OR14L1PQ8NHC6 308 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 CIDECQ96AQ7 238 aaPredicted RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 EFHD2Q96C19 240 aaPredicted RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 GNRHR2Q96P88 292 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 PAIP2Q9BPZ3 127 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 LMF2Q9BU23 707 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 NEUROD4Q9HD90 331 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 NOP53Q9NZM5 478 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 TNFRSF10DQ9UBN6 386 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 BAIAP2L1Q9UHR4 511 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 DKKL1Q9UK85 242 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 NCKAP5O14513 1909 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
SPG7-211ENST00000565370 NINQ8N4C6 2090 aa11.23□□□□□ -0.61
SPG7-211ENST00000565370 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 FAM90A27PA6NNH2 459 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 CBR3O75828 277 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 DHRS4L1P0CG22 281 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PRPS1L1P21108 318 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 ARRB2P32121 409 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 EVI2BP34910 448 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 FRKP42685 505 aaPredicted RBP11.22□□□□□ -0.61
SPG7-211ENST00000565370 RFX3P48380 749 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 SLC1A6P48664 564 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PRIM2P49643 509 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PRKAG1P54619 331 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 NUP107P57740 925 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 CRYZQ08257 329 aaKnown RBP11.22□□□□□ -0.61
SPG7-211ENST00000565370 PMPCAQ10713 525 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PTGR1Q14914 329 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 MLC1Q15049 377 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PRSS53Q2L4Q9 553 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 SMU1Q2TAY7 513 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 TNFAIP8L3Q5GJ75 292 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 EMC4Q5J8M3 183 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 C6orf136Q5SQH8 315 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 FNDC7Q5VTL7 733 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 GDF7Q7Z4P5 450 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PLCZ1Q86YW0 608 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 ULK2Q8IYT8 1036 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 MARVELD2Q8N4S9 558 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 ZNF781Q8N8C0 355 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 FAM83FQ8NEG4 500 aaPredicted RBP11.22□□□□□ -0.61
SPG7-211ENST00000565370 NUP43Q8NFH3 380 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 OR4K17Q8NGC6 315 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 JADE3Q92613 823 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 TTYH2Q9BSA4 534 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 SERHLQ9NQF3 203 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 SDHAF3Q9NRP4 125 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 NKIRAS1Q9NYS0 192 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 PPP4R1LQ9P1A2 415 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 GIMAP2Q9UG22 337 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 ATP6V1HQ9UI12 483 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 RNF6Q9Y252 685 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.22□□□□□ -0.61
SPG7-211ENST00000565370 CENPEQ02224 2701 aa11.22□□□□□ -0.61
SPG7-211ENST00000565370 A0A1W2PRB8 838 aa11.21□□□□□ -0.61
SPG7-211ENST00000565370 TMEM120BA0PK00 339 aa11.21□□□□□ -0.61
SPG7-211ENST00000565370 EMC8O43402 210 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms