RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ZNHIT3Q15649 155 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 EXOSC6Q5RKV6 272 aaKnown RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ATAD3BQ5T9A4 648 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 GLYATQ6IB77 296 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 LCN8Q6JVE9 175 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 CYP2R1Q6VVX0 501 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 RNF111Q6ZNA4 994 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 SLC44A2Q8IWA5 706 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ZNF321PQ8N8H1 164 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ZNF615Q8N8J6 731 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 SLC16A11Q8NCK7 471 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 HIPK4Q8NE63 616 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 C16orf52Q8NHV5 167 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 NFKBIDQ8NI38 313 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ZNF721Q8TF20 911 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 XAGE5Q8WWM1 108 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 FAM162AQ96A26 154 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 C8orf44Q96CB5 159 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 NSMCE2Q96MF7 247 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 VSTM2LQ96N03 204 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 LPAR4Q99677 370 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 WDR77Q9BQA1 342 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 MESP1Q9BRJ9 268 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 LMF2Q9BU23 707 aaKnown RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 GPR87Q9BY21 358 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ANGPT4Q9Y264 503 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 CFL2Q9Y281 166 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 HS3ST3B1Q9Y662 390 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 LRBAP50851 2863 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ICE1Q9Y2F5 2266 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 ANKRD17O75179 2603 aaKnown RBP10.28□□□□□ -0.76
SF3B3-205ENST00000564899 LOC102723996A0A087X1L8 192 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 LOC101059948A0A1B0GTJ6 334 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 DUXAA6NLW8 204 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SEC24DO94855 1032 aaPredicted RBP10.28□□□□□ -0.76
SF3B3-205ENST00000564899 BCHEP06276 602 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 NR2F1P10589 423 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 MMP11P24347 488 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 OTX2P32243 289 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SLC37A1P57057 533 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 HPCAP84074 193 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 CCNIQ14094 377 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 IGFBP7Q16270 282 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 TBR1Q16650 682 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 DUSP5Q16690 384 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 INTS11Q5TA45 600 aaKnown RBP10.28□□□□□ -0.76
SF3B3-205ENST00000564899 C16orf62Q7Z3J2 963 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SPATA24Q86W54 205 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SPPL2CQ8IUH8 684 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SLC30A8Q8IWU4 369 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 IL22RA1Q8N6P7 574 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 METTL25Q8N6Q8 603 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 COX18Q8N8Q8 333 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 B3GNT7Q8NFL0 401 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 OR1N1Q8NGS0 311 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 GPR151Q8TDV0 419 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 CDS1Q92903 461 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 NKD1Q969G9 470 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SLC35A4Q96G79 324 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 TMEM19Q96HH6 336 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 RSRC1Q96IZ7 334 aaKnown RBP10.28□□□□□ -0.76
SF3B3-205ENST00000564899 STACQ99469 402 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 NUDT9Q9BW91 350 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 ITPAQ9BY32 194 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 PIGUQ9H490 435 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 DUSP22Q9NRW4 184 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 DTX4Q9Y2E6 619 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 KCNE3Q9Y6H6 103 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 SCN2AQ99250 2005 aa10.28□□□□□ -0.76
SF3B3-205ENST00000564899 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.76
SF3B3-205ENST00000564899 PRAMEF27A3QJZ7 478 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 TTC36A6NLP5 189 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 AQP12BA6NM10 295 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 OR6C76A6NM76 312 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 A8MVJ9 347 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 CREG1O75629 220 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 NKX2-2O95096 273 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 TFPTP0C1Z6 253 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 LIPCP11150 499 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 COX6A1P12074 109 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 F8A1P23610 371 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 AQP1P29972 269 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 GABRA3P34903 492 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 MAP3K8P41279 467 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 CRISP3P54108 245 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 SLC26A5P58743 744 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 FUT5Q11128 374 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 GNA13Q14344 377 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 PCOLCEQ15113 449 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 EBPQ15125 230 aaKnown RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 SYPL1Q16563 259 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 GPAT3Q53EU6 434 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 LRRC23Q53EV4 343 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 MTX3Q5HYI7 312 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 RPS26P11Q5JNZ5 115 aaPredicted RBP10.27□□□□□ -0.77
SF3B3-205ENST00000564899 HEPHL1Q6MZM0 1159 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 REEP3Q6NUK4 255 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 SLC29A4Q7RTT9 530 aa10.27□□□□□ -0.77
SF3B3-205ENST00000564899 PPP1R32Q7Z5V6 425 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms