RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 PSD2Q9BQI7 771 aa18.2■□□□□ 0.5
CLN6-205ENST00000564846 CNPPD1Q9BV87 410 aa18.2■□□□□ 0.5
CLN6-205ENST00000564846 KRT84Q9NSB2 600 aa18.2■□□□□ 0.5
CLN6-205ENST00000564846 SIDT1Q9NXL6 827 aaKnown RBP18.2■□□□□ 0.5
CLN6-205ENST00000564846 SYNDIG1LA6NDD5 238 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 TTC36A6NLP5 189 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 M0R3H8 397 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 SLC16A6O15403 523 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 CLIC3O95833 236 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 THBS1P07996 1170 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 GUSBP08236 651 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 PGDP52209 483 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 PSG6Q00889 435 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 TRA2AQ13595 282 aaKnown RBP eCLIP18.19■□□□□ 0.5
CLN6-205ENST00000564846 LARS2Q15031 903 aaKnown RBP18.19■□□□□ 0.5
CLN6-205ENST00000564846 CCNJQ5T5M9 372 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 PHF19Q5T6S3 580 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 MFSD4BQ5TF39 518 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 AP1ARQ63HQ0 302 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 HMGN2P46Q86SG4 172 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 BPHLQ86WA6 291 aaPredicted RBP18.19■□□□□ 0.5
CLN6-205ENST00000564846 VRK2Q86Y07 508 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 RBM45Q8IUH3 476 aaKnown RBP18.19■□□□□ 0.5
CLN6-205ENST00000564846 LACC1Q8IV20 430 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 TAGAPQ8N103 731 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 OR7G1Q8NGA0 311 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 NMNAT1Q9HAN9 279 aaPredicted RBP18.19■□□□□ 0.5
CLN6-205ENST00000564846 ERVK-19Q9WJR5 959 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 ARRDC5A6NEK1 342 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 AGAP5A6NIR3 686 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 D6RAR5 112 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 HRKO00198 91 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 DYRK3O43781 588 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 SEMA7AO75326 666 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 LDOC1O95751 146 aaPredicted RBP18.19■□□□□ 0.5
CLN6-205ENST00000564846 GP1BAP07359 652 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 RHAGQ02094 409 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 OFCC1Q8IZS5 231 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 OR6T1Q8NGN1 323 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 NR4A3Q92570 626 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 MUS81Q96NY9 551 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 ALPK1Q96QP1 1244 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 ARHGDIGQ99819 225 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 WFDC6Q9BQY6 131 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 OR10A5Q9H207 317 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 PRODH2Q9UF12 536 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 ZNF443Q9Y2A4 671 aaPredicted RBP18.19■□□□□ 0.5
CLN6-205ENST00000564846 MYRFQ9Y2G1 1151 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 HCN4Q9Y3Q4 1203 aa18.19■□□□□ 0.5
CLN6-205ENST00000564846 LOC100130705A0A1B0GUX0 176 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 C17orf105B2RV13 164 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 FLRT2O43155 660 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 KIAA0513O60268 411 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 BRINP1O60477 761 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 MITFO75030 526 aaPredicted RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 UGT2B11O75310 529 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 SCRG1O75711 98 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 CCNB2O95067 398 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 DBIP07108 87 aaKnown RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 H1F0P07305 194 aaKnown RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 HBQ1P09105 142 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 ATXN8OSP0DMR3 200 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 IL7RP16871 459 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 PIGAP37287 484 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 GTF2A1P52655 376 aaPredicted RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 IL18R1Q13478 541 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 GPR68Q15743 365 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 EIPR1Q53HC9 387 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 VWA2Q5GFL6 755 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 TTC33Q6PID6 262 aaPredicted RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 GALNT5Q7Z7M9 940 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 C8orf59Q8N0T1 100 aaPredicted RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 RMND5BQ96G75 393 aaPredicted RBP18.18■□□□□ 0.5
CLN6-205ENST00000564846 FEVQ99581 238 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 TGIF2Q9GZN2 237 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 RHCGQ9UBD6 479 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 A4GNTQ9UNA3 340 aa18.18■□□□□ 0.5
CLN6-205ENST00000564846 TCRBV16S1A1N1A0A5B0 115 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 LNP1A1A4G5 178 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 H3BNH8 94 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PCDH17O14917 1159 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 GALR2O43603 387 aaPredicted RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 UGT2B17O75795 530 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 KCNK2O95069 426 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 RPS4Y1P22090 263 aaKnown RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 ACP1P24666 158 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 CSTF2P33240 577 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLN6-205ENST00000564846 RORAP35398 523 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 RPS6KA3P51812 740 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 IL1RL1Q01638 556 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PPP1R3BQ86XI6 285 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 SLC5A8Q8N695 610 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 ZNF615Q8N8J6 731 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PTPMT1Q8WUK0 201 aaPredicted RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 TSLPQ969D9 159 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PRRC1Q96M27 445 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PNO1Q9NRX1 252 aaKnown RBP18.17■□□□□ 0.5
CLN6-205ENST00000564846 TMCC3Q9ULS5 477 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 PCDHGA8Q9Y5G5 932 aa18.17■□□□□ 0.5
CLN6-205ENST00000564846 R4GN57 208 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms