RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PPP1R16AQ96I34 528 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 ERMAPQ96PL5 475 aaPredicted RBP10.43□□□□□ -0.74
TCF4-222ENST00000564228 LYSMD1Q96S90 227 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 USB1Q9BQ65 265 aaKnown RBP10.43□□□□□ -0.74
TCF4-222ENST00000564228 WACQ9BTA9 647 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 ZNF436Q9C0F3 470 aaPredicted RBP10.43□□□□□ -0.74
TCF4-222ENST00000564228 RDH14Q9HBH5 336 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 SLC2A4RGQ9NR83 387 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 EMC3Q9P0I2 261 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 BTNL2Q9UIR0 455 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 CA14Q9ULX7 337 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 NPTNQ9Y639 398 aa10.43□□□□□ -0.74
TCF4-222ENST00000564228 TRDV1A0A1B0GX56 115 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 TMEM129A0AVI4 362 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 M0R233 179 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 GPR39O43194 453 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 C1QCP02747 245 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 PEPDP12955 493 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 OSMP13725 252 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 HOXB2P14652 356 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 MMP12P39900 470 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 GSTM5P46439 218 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 HOXA1P49639 335 aaPredicted RBP10.42□□□□□ -0.74
TCF4-222ENST00000564228 CDKN1CP49918 316 aaPredicted RBP10.42□□□□□ -0.74
TCF4-222ENST00000564228 WNT4P56705 351 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 PTSQ03393 145 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 RBBP4Q09028 425 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 ILKQ13418 452 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 ZNF169Q14929 603 aaPredicted RBP10.42□□□□□ -0.74
TCF4-222ENST00000564228 ZMYND11Q15326 602 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 UGT8Q16880 541 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 TUSC1Q2TAM9 212 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 ZRANB3Q5FWF4 1079 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 NHLRC3Q5JS37 347 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 CDKL4Q5MAI5 379 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 SLC25A30Q5SVS4 291 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 FAM151BQ6UXP7 276 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 FGD2Q7Z6J4 655 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 OR8J1Q8NGP2 316 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 OR52J3Q8NH60 311 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 RPLP0P6Q8NHW5 317 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 SELENOMQ8WWX9 145 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 GTPBP3Q969Y2 492 aaKnown RBP10.42□□□□□ -0.74
TCF4-222ENST00000564228 SLC6A18Q96N87 628 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 EGFL8Q99944 293 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 TSSK6Q9BXA6 273 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 DPAGT1Q9H3H5 408 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 MCCC2Q9HCC0 563 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 SARS2Q9NP81 518 aaKnown RBP10.42□□□□□ -0.74
TCF4-222ENST00000564228 CD93Q9NPY3 652 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 DNAJC27Q9NZQ0 273 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 COPZ2Q9P299 210 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 MALT1Q9UDY8 824 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 SPIN1Q9Y657 262 aaPredicted RBP10.42□□□□□ -0.74
TCF4-222ENST00000564228 PLXNA2O75051 1894 aa10.42□□□□□ -0.74
TCF4-222ENST00000564228 SLC22A23A1A5C7 686 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 C1orf226A1L170 272 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 PIPSLA2A3N6 862 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 SHISA7A6NL88 538 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 H0YC42 278 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 GTPBP1O00178 669 aaKnown RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 CASKO14936 926 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 MID1O15344 667 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 PSIP1O75475 530 aaKnown RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 GADD45GO95257 159 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 CFDP00746 253 aaPredicted RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 C1SP09871 688 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 ADRB3P13945 408 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 AMD1P17707 334 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 VIPR1P32241 457 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 RPS25P62851 125 aaKnown RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 ZP2Q05996 745 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 LRRC74AQ0VAA2 488 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 RGNQ15493 299 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 MLF2Q15773 248 aaPredicted RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 FAM46CQ5VWP2 391 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 ZNF770Q6IQ21 691 aaPredicted RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 NOXRED1Q6NXP6 359 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 BHLHB9Q6PI77 547 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 LRFN4Q6PJG9 635 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 OR8D4Q8NGM9 314 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 RFT1Q96AA3 541 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 FOPNLQ96NB1 174 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 WRAP53Q9BUR4 548 aaKnown RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 NMNAT1Q9HAN9 279 aaPredicted RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 DLL4Q9NR61 685 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 ZNF275Q9NSD4 429 aaPredicted RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 CD84Q9UIB8 345 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 COPS3Q9UNS2 423 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 CACNG2Q9Y698 323 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 ENPP4Q9Y6X5 453 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 KCNE1BA0A087WTH5 132 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 ADAM11O75078 769 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 LRATO95237 230 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 CPSF4O95639 269 aaKnown RBP10.41□□□□□ -0.74
TCF4-222ENST00000564228 GUCA1CO95843 209 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 PAHP00439 452 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 SOD1P00441 154 aa10.41□□□□□ -0.74
TCF4-222ENST00000564228 IFNA14P01570 189 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms