RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 SLC15A4Q8N697 577 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 FRMD1Q8N878 549 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 PIGXQ8TBF5 258 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 LRRC61Q9BV99 259 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 LMAN1LQ9HAT1 526 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CTPS2Q9NRF8 586 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SEMA4GQ9NTN9 838 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 MKLN1Q9UL63 735 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CLCA2Q9UQC9 943 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 B3GNT3Q9Y2A9 372 aa19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 GPR55Q9Y2T6 319 aaPredicted RBP19.94■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CPSF4LA6NMK7 179 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 FAM170BA6NMN3 283 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CLDN25C9JDP6 229 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SOX30O94993 753 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CSTF2P33240 577 aaKnown RBP eCLIP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 GIPRP48546 466 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SKP1P63208 163 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CDK5Q00535 292 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ID2Q02363 134 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TSPAN31Q12999 210 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ELOCQ15369 112 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 DECR1Q16698 335 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TRMT12Q53H54 448 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 PRSS41Q7RTY9 318 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZNF761Q86XN6 746 aaPredicted RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TCEANCQ8N8B7 351 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TEX47Q8TBZ9 253 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 PMM1Q92871 262 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TMEM80Q96HE8 168 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SH3YL1Q96HL8 342 aaPredicted RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SDF2Q99470 211 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 MCHR1Q99705 422 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 PRRG3Q9BZD7 231 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 POLR2J2Q9GZM3 115 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TMEM74BQ9NUR3 256 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TVP23BQ9NYZ1 205 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 DNAJC27Q9NZQ0 273 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CHST2Q9Y4C5 530 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 IGHV1OR15-9A0A0B4J2B8 117 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 LDB3O75112 727 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 STX11O75558 287 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 DBIP07108 87 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TYRP1P17643 537 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CDH3P22223 829 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 GADD45AP24522 165 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 OPRL1P41146 370 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 RNLSQ5VYX0 342 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 USP43Q70EL4 1123 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TMEFF1Q8IYR6 380 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZNF619Q8N2I2 560 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CLIP4Q8N3C7 705 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 C19orf47Q8N9M1 422 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 WDR36Q8NI36 951 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ACOT11Q8WXI4 607 aaPredicted RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 RPL3LQ92901 407 aaKnown RBP19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZNF350Q9GZX5 532 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ADAP2Q9NPF8 381 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 OSGIN1Q9UJX0 560 aa19.93■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 AGAP5A6NIR3 686 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 FRS3O43559 492 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ST6GAL1P15907 406 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZNF12P17014 697 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 RGS6P49758 472 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 PPP1CAP62136 330 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 RHAGQ02094 409 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TIMM50Q3ZCQ8 353 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 NIPAL1Q6NVV3 410 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZBTB46Q86UZ6 589 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 KBTBD8Q8NFY9 601 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 OR5T3Q8NGG3 340 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 DCSTAMPQ9H295 470 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TTYH1Q9H313 450 aaPredicted RBP19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 UCK1Q9HA47 277 aa19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 KRCC1Q9NPI7 259 aaPredicted RBP19.92■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SNTNA6NMZ2 147 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 UBXN7O94888 489 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 CD27P26842 260 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 STAT5AP42229 794 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 PRICKLE4Q2TBC4 344 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 DCST2Q5T1A1 773 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZNF836Q6ZNA1 936 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 RASSF6Q6ZTQ3 369 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 RANBP3LQ86VV4 465 aaPredicted RBP19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 GKN2Q86XP6 184 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 MCATQ8IVS2 390 aaKnown RBP19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ZNF687Q8N1G0 1237 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 IQCF1Q8N6M8 205 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TMCO5AQ8N6Q1 288 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 COX18Q8N8Q8 333 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TMEM52Q8NDY8 209 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 HSPBAP1Q96EW2 488 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 GPA33Q99795 319 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 TEX12Q9BXU0 123 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 SAP130Q9H0E3 1048 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 FBXO8Q9NRD0 319 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 POLE3Q9NRF9 147 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 MAT2BQ9NZL9 334 aa19.91■□□□□ 0.78
VPS9D1-AS1-202ENST00000562866 ERGIC3Q9Y282 383 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms