RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PPP4R1LQ9P1A2 415 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 HEY2Q9UBP5 337 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 MCM8Q9UJA3 840 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 FLNAP21333 2647 aaKnown RBP11.76□□□□□ -0.53
SF3B3-202ENST00000562722 MPDZO75970 2070 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 DNHD1Q96M86 4753 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 MAP1AP78559 2803 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 UQCRHLA0A096LP55 91 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 FAM171A2A8MVW0 826 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 TRIM49D1C9J1S8 452 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 MANBAO00462 879 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 SUPT7LO94864 414 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CT45A8P0DMV1 189 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CT45A9P0DMV2 189 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 TAC1P20366 129 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 HMOX2P30519 316 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 MAGEA12P43365 314 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 KCNJ5P48544 419 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 PSPHP78330 225 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CLCQ05315 142 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 FAM27E3Q08E93 113 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CSTF3Q12996 717 aaKnown RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 STX5Q13190 355 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 HEPACAMQ14CZ8 416 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 RASA2Q15283 850 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CT45A2Q5DJT8 189 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CXorf67Q86X51 503 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 SAMD14Q8IZD0 417 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 FAM9CQ8IZT9 166 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 C17orf53Q8N3J3 647 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 GBP7Q8N8V2 638 aaPredicted RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CDC26Q8NHZ8 85 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 PIGTQ969N2 578 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 ERP27Q96DN0 273 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 MTBPQ96DY7 904 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 WFIKKN1Q96NZ8 548 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CCL19Q99731 98 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 CDC42EP4Q9H3Q1 356 aaKnown RBP11.75□□□□□ -0.53
SF3B3-202ENST00000562722 FOLH1BQ9HBA9 442 aa11.75□□□□□ -0.53
SF3B3-202ENST00000562722 NIPBLQ6KC79 2804 aaeCLIP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ABCA2Q9BZC7 2435 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 C17orf51A8MQB3 221 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 SEC14L5O43304 696 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 HCRTR2O43614 444 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ZIC3O60481 467 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 TSPAN2O60636 221 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ULK1O75385 1050 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 CRHP06850 196 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 HEXAP06865 529 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 PEPDP12955 493 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 HSD3B1P14060 373 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 POU2F1P14859 743 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 CHN1P15882 459 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 HK1P19367 917 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 HSD3B2P26439 372 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 CD79BP40259 229 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 DSCR4P56555 118 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 EEFSECP57772 596 aaKnown RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ACSM2AQ08AH3 577 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 SPIN4Q56A73 249 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ACSM2BQ68CK6 577 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 PPP4R4Q6NUP7 873 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 VWA1Q6PCB0 445 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 NPSR1Q6W5P4 371 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 GPRIN3Q6ZVF9 776 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 OR4N2Q8NGD1 307 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 UHMK1Q8TAS1 419 aaKnown RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 METTL6Q8TCB7 284 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 NUDT8Q8WV74 236 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 STARD4Q96DR4 205 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 PGM2Q96G03 612 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF845Q96IR2 970 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 VSTM2LQ96N03 204 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 BBS4Q96RK4 519 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 SLC39A3Q9BRY0 314 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 EBPLQ9BY08 206 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 DSN1Q9H410 356 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 TAS2R9Q9NYW1 312 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 NFU1Q9UMS0 254 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 MRPS18CQ9Y3D5 142 aaKnown RBP11.74□□□□□ -0.53
SF3B3-202ENST00000562722 MED12Q93074 2177 aa11.74□□□□□ -0.53
SF3B3-202ENST00000562722 H3BML4 177 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 H7C1Q1 480 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 SMAD7O15105 426 aaKnown RBP11.73□□□□□ -0.53
SF3B3-202ENST00000562722 CTIFO43310 598 aaKnown RBP11.73□□□□□ -0.53
SF3B3-202ENST00000562722 COQ9O75208 318 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 EVI2BP34910 448 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 MPIP34949 423 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 HSD17B3P37058 310 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 RFX3P48380 749 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 CLK3P49761 638 aaKnown RBP11.73□□□□□ -0.53
SF3B3-202ENST00000562722 ETF1P62495 437 aaKnown RBP11.73□□□□□ -0.53
SF3B3-202ENST00000562722 BTKQ06187 659 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF572Q7Z3I7 529 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-202ENST00000562722 BTLAQ7Z6A9 289 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms