RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 GALNT10Q86SR1 603 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 SIMC1Q8NDZ2 872 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 OR2Y1Q8NGV0 311 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 ZNF721Q8TF20 911 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 TAMM41Q96BW9 452 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 HSH2DQ96JZ2 352 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 VSTM2LQ96N03 204 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 ZNF347Q96SE7 839 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 SPSB2Q99619 263 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 PINK1Q9BXM7 581 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 RUBCNLQ9H714 662 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 AGPAT4Q9NRZ5 378 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 KLHL28Q9NXS3 571 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 DNAJB9Q9UBS3 223 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 GPR55Q9Y2T6 319 aaPredicted RBP9.57□□□□□ -0.88
USP3-219ENST00000561326 SH3GLB1Q9Y371 365 aa9.57□□□□□ -0.88
USP3-219ENST00000561326 FAM32AQ9Y421 112 aaKnown RBP9.57□□□□□ -0.88
USP3-219ENST00000561326 PRAMEF27A3QJZ7 478 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SAGE2PA6NJ88 616 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 C9orf172C9J069 976 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SLC30A4O14863 429 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 TM4SF5O14894 197 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 PEX1O43933 1283 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 NME6O75414 186 aaPredicted RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 KCNK2O95069 426 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 DLGAP3O95886 979 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 OPN1SWP03999 348 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 IFNW1P05000 195 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 DBIP07108 87 aaKnown RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 CHRM4P08173 479 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 IL7RP16871 459 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SDHBP21912 280 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 CD82P27701 267 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 KRT20P35900 424 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 KCNJ5P48544 419 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 ARHGDIAP52565 204 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 CLDN6P56747 220 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 KCNJ10P78508 379 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 PSG6Q00889 435 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 KCNC4Q03721 635 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 CHRNEQ04844 493 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 DUSP8Q13202 625 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 GPR68Q15743 365 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 MAPK11Q15759 364 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 ZSWIM7Q19AV6 140 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 ZNF311Q5JNZ3 666 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 RPS26P11Q5JNZ5 115 aaPredicted RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 AP1ARQ63HQ0 302 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 FAM198BQ6UWH4 519 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 LANCL3Q6ZV70 420 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 PIWIL3Q7Z3Z3 882 aaKnown RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 VTCN1Q7Z7D3 282 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 NLGN4XQ8N0W4 816 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 LILRA2Q8N149 483 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 ZNF619Q8N2I2 560 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 FAM86B1Q8N7N1 296 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 TMEM102Q8N9M5 508 aaPredicted RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 B3GNT7Q8NFL0 401 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 NLGN4YQ8NFZ3 816 aaPredicted RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 OR5L2Q8NGL0 311 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 OR10Q1Q8NGQ4 319 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 PIK3R3Q92569 461 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 PMEPA1Q969W9 287 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 EME1Q96AY2 570 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 NACC2Q96BF6 587 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 VMP1Q96GC9 406 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 LCORQ96JN0 433 aaPredicted RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 ZNF354BQ96LW1 612 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 BTBD9Q96Q07 612 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 C9orf16Q9BUW7 83 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 NUDT9Q9BW91 350 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 GPR87Q9BY21 358 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SPRY4Q9C004 299 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 KLHL4Q9C0H6 718 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SAP130Q9H0E3 1048 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SEMA6AQ9H2E6 1030 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 SLC38A1Q9H2H9 487 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 EVA1AQ9H8M9 152 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 AKIRIN1Q9H9L7 192 aaPredicted RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 POLR1BQ9H9Y6 1135 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 C8orf4Q9NR00 106 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 RIMS3Q9UJD0 308 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 CDV3Q9UKY7 258 aaKnown RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 MKLN1Q9UL63 735 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 CBLCQ9ULV8 474 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 FARSAQ9Y285 508 aaKnown RBP9.56□□□□□ -0.88
USP3-219ENST00000561326 SLC9A8Q9Y2E8 581 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 MYO15AQ9UKN7 3530 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 AHCTF1Q8WYP5 2266 aa9.56□□□□□ -0.88
USP3-219ENST00000561326 DMDP11532 3685 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 TEX51A0A1B0GUA7 166 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 GXYLT2A0PJZ3 443 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 FRG2CA6NGY1 282 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 C21orf140B9A014 251 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 STMND1H3BQB6 276 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 FCMRO60667 390 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 DPM1O60762 260 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 CNOT3O75175 753 aaKnown RBP9.55□□□□□ -0.88
USP3-219ENST00000561326 E2F6O75461 281 aa9.55□□□□□ -0.88
USP3-219ENST00000561326 KLF7O75840 302 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms