RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 F8VZ95 297 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PSMD9O00233 223 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 WWP2O00308 870 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 TXNDC9O14530 226 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PSMA7O14818 248 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 STX7O15400 261 aaKnown RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 PIN1P1O15428 100 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 RDH16O75452 317 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ZFAND5O76080 213 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ACSL3O95573 720 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 TGM6O95932 706 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 FTCDO95954 541 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 EPOP01588 193 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PRB2P02812 416 aaPredicted RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 ALPLP05186 524 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CALB1P05937 261 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 HPNP05981 417 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 FHP07954 510 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 FAM90A13PP0C7W8 464 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 FAM90A24PP0C7X0 464 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PRSS56P0CW18 603 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ATP1A3P13637 1013 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 POU2F1P14859 743 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CPN1P15169 458 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 IL1RNP18510 177 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PTNP21246 168 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 TBXA2RP21731 343 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 IL10P22301 178 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 EPHA3P29320 983 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NSFP46459 744 aaKnown RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 NUDT6P53370 316 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NAGLUP54802 743 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ID2Q02363 134 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CFHR3Q02985 330 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 GBE1Q04446 702 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PPIDQ08752 370 aaKnown RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 KIF5AQ12840 1032 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SLC13A2Q13183 592 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 RAB32Q13637 225 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PKP1Q13835 747 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NRF1Q16656 503 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NDUFA9Q16795 377 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ZNF672Q499Z4 452 aaPredicted RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 BOLA3Q53S33 107 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 DNAJC21Q5F1R6 531 aaKnown RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 CCDC122Q5T0U0 273 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ISM2Q6H9L7 571 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CCDC70Q6NSX1 233 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ZDHHC24Q6UX98 284 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CCBE1Q6UXH8 406 aaPredicted RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 CLEC17AQ6ZS10 378 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 GLT6D1Q7Z4J2 308 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 VN1R4Q7Z5H5 301 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 GPSM1Q86YR5 675 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 MCOLN2Q8IZK6 566 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SPARTQ8N0X7 666 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SLC25A41Q8N5S1 370 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ZDHHC22Q8N966 263 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 OR4K2Q8NGD2 314 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 OR56A3Q8NH54 315 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SLC35G2Q8TBE7 412 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ZCCHC10Q8TBK6 192 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 BLOC1S5Q8TDH9 187 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ADAMTS15Q8TE58 950 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ZNF418Q8TF45 676 aaPredicted RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 HEXDCQ8WVB3 486 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NELFBQ8WX92 580 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 ELMO1Q92556 727 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 HSPH1Q92598 858 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 TBC1D20Q96BZ9 403 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PGM2Q96G03 612 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 GSDMAQ96QA5 445 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 OR1F2PQ96R84 312 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SLC39A3Q9BRY0 314 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NTMT1Q9BV86 223 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SLITRK2Q9H156 845 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 UBQLN3Q9H347 655 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 GOLPH3LQ9H4A5 285 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 VPS37BQ9H9H4 285 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 NECTIN3Q9NQS3 549 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 SNX15Q9NRS6 342 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 TMEM184CQ9NVA4 438 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 HAUS2Q9NVX0 235 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 RMND1Q9NWS8 449 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 PDP1Q9P0J1 537 aaPredicted RBP3.32□□□□□ -1.88
HERC1-211ENST00000560983 CRLS1Q9UJA2 301 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CLDN16Q9Y5I7 305 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 MED12Q93074 2177 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
HERC1-211ENST00000560983 CADP27708 2225 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 KCNE1BA0A087WTH5 132 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 TRBV5-4A0A0C4DH59 114 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 A0A1W2PP18 115 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 A0A1W2PPL8 197 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 PABPN1LA6NDY0 278 aaKnown RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 GFYI3L273 518 aa3.31□□□□□ -1.88
HERC1-211ENST00000560983 EIF3FO00303 357 aaPredicted RBP3.31□□□□□ -1.88
HERC1-211ENST00000560983 CCL22O00626 93 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms