RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 HMGN4O00479 90 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 TSPAN6O43657 245 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 EFCAB14O75071 495 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 SOCS5O75159 536 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 BMP8BP34820 402 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 DGCR2P98153 550 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 BMP8AQ7Z5Y6 402 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 OAFQ86UD1 273 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 TRPV1Q8NER1 839 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 ACOT12Q8WYK0 555 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 TMEM159Q96B96 161 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 SLC38A2Q96QD8 506 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 TREX2Q9BQ50 279 aaPredicted RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 KLHL1Q9NR64 748 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 LYARQ9NX58 379 aaKnown RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 MRPL15Q9P015 296 aaKnown RBP15.51■□□□□ 0.07
TPM1-228ENST00000560975 SCP2D1Q9UJQ7 156 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 PLXND1Q9Y4D7 1925 aa15.51■□□□□ 0.07
TPM1-228ENST00000560975 SOX30O94993 753 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 CATP04040 527 aaKnown RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 PROS1P07225 676 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 SULT1A3P0DMM9 295 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 SULT1A4P0DMN0 295 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ACP5P13686 325 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 PDHA2P29803 388 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 PTGER1P34995 402 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 GATMP50440 423 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 PLD1Q13393 1074 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 LDLRAD1Q5T700 205 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 HBMQ6B0K9 141 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 NLRC3Q7RTR2 1065 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 C2orf73Q8N5S3 287 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 OR52H1Q8NGJ2 320 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 OR2T4Q8NH00 348 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ERMAPQ96PL5 475 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZNF607Q96SK3 696 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 A4GALTQ9NPC4 353 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 TRPC4Q9UBN4 977 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 A0A1B0GVI7 797 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 A0A1W2PRQ8 180 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 TMEM189-UBE2V1I3L0A0 370 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZNF821O75541 412 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 UBXN7O94888 489 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 POU3F2P20265 443 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZP3P21754 424 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 RBMS1P29558 406 aaKnown RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 RPL3P39023 403 aaKnown RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 BUD31P41223 144 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 CTSOP43234 321 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 SPINT3P49223 89 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 TBPL1P62380 186 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 GPR68Q15743 365 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ESPNLQ6ZVH7 1005 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 TRMT10AQ8TBZ6 339 aaKnown RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 ST8SIA2Q92186 375 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZNF578Q96N58 590 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 UBL7Q96S82 380 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZDHHC6Q9H6R6 413 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 DDX31Q9H8H2 851 aaKnown RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 TDP1Q9NUW8 608 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 B4GALT6Q9UBX8 382 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ACAD8Q9UKU7 415 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 FLVCR2Q9UPI3 526 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 STON1Q9Y6Q2 735 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 PRAMEF27A3QJZ7 478 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 FRS3O43559 492 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 RNF13O43567 381 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 FZD7O75084 574 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 RGS9O75916 674 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 SLC2A10O95528 541 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ALDOBP05062 364 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ANKRD34CP0C6C1 535 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 BLVRAP53004 296 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 GRIN2CQ14957 1233 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 OPCMLQ14982 345 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 MORN1Q5T089 497 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 C1orf94Q6P1W5 598 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 WASH2PQ6VEQ5 465 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 RASSF6Q6ZTQ3 369 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 PRICKLE2Q7Z3G6 844 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 MORN4Q8NDC4 146 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZFPM2Q8WW38 1151 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ECHDC3Q96DC8 303 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 NEURL3Q96EH8 262 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 FAM46AQ96IP4 442 aaKnown RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 SFXN2Q96NB2 322 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 ZNF436Q9C0F3 470 aaPredicted RBP15.5■□□□□ 0.07
TPM1-228ENST00000560975 CSNK1G3Q9Y6M4 447 aa15.5■□□□□ 0.07
TPM1-228ENST00000560975 A0A0B4J203 849 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 FAM183AA6NL82 134 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 HNRNPCL2B2RXH8 293 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 G3V3Q6 166 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 ZNF593O00488 134 aaPredicted RBP15.49■□□□□ 0.07
TPM1-228ENST00000560975 CHST10O43529 356 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 MTRF1O75570 445 aaKnown RBP15.49■□□□□ 0.07
TPM1-228ENST00000560975 VIPR1P32241 457 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 RFX3P48380 749 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 CNTN1Q12860 1018 aa15.49■□□□□ 0.07
TPM1-228ENST00000560975 TAF12Q16514 161 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms