RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 COL21A1Q96P44 957 aa14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 NODALQ96S42 347 aa14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 ANGPTL4Q9BY76 406 aa14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 TSPAN10Q9H1Z9 355 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 Q9N2J8 555 aa14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 GPATCH2Q9NW75 528 aa14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 FAM120CQ9NX05 1096 aaKnown RBP14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 SNX8Q9Y5X2 465 aa14.21□□□□□ -0.13
RABGGTA-219ENST00000560871 ICE1Q9Y2F5 2266 aa14.21□□□□□ -0.14
RABGGTA-219ENST00000560871 PRSS51A0A1B0GVH4 220 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 GXYLT2A0PJZ3 443 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ADAM10O14672 748 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 HS6ST1O60243 411 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 TRIM3O75382 744 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 HMGN2P05204 90 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 PGRP06401 933 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 STSP08842 583 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CASP3P42574 277 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CCT3P49368 545 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 DGKQP52824 942 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 PNLIPRP2P54317 469 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 RPP38P78345 283 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 LASP1Q14847 261 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ZNHIT3Q15649 155 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 DUSP5Q16690 384 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CYP27C1Q4G0S4 372 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CMPK2Q5EBM0 449 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ANXA8L1Q5VT79 327 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 FNDC7Q5VTL7 733 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 HIST2H2BCQ6DN03 193 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CGB2Q6NT52 195 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ANKRD46Q86W74 232 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CHERPQ8IWX8 916 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 OR56A1Q8NGH5 318 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 OR5AK3PQ8NH89 298 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 GOT1L1Q8NHS2 421 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 PIK3R3Q92569 461 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 MOAP1Q96BY2 351 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 EFHD2Q96C19 240 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 THOC1Q96FV9 657 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 C16orf58Q96GQ5 468 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CCDC115Q96NT0 180 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ADOQ96SZ5 270 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 SIKE1Q9BRV8 207 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 DOHHQ9BU89 302 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ZNF703Q9H7S9 590 aaPredicted RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 ZDHHC11Q9H8X9 412 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 IL1RL2Q9HB29 575 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 PLSCR2Q9NRY7 297 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 BTNL2Q9UIR0 455 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 CBLCQ9ULV8 474 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 OR10H1Q9Y4A9 318 aa14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.2□□□□□ -0.14
RABGGTA-219ENST00000560871 RNF103-CHMP3A0A140T963 221 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 NPIPA5E9PKD4 350 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 ACOT7O00154 380 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 DYNC1I1O14576 645 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 TFECO14948 347 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 CFLARO15519 480 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 LRRTM2O43300 516 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 REM1O75628 298 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 SLC22A3O75751 556 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 IL33O95760 270 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 IGKV1D-16P01601 117 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 CYP4B1P13584 511 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 IL12BP29460 328 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 S100A3P33764 101 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 SOAT1P35610 550 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 KRT20P35900 424 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 MAN2A2P49641 1150 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 PRIM2P49643 509 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 KCNK10P57789 538 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 KCNJ2P63252 427 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 TP53BP2Q13625 1128 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 EFR3AQ14156 821 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 VPS26BQ4G0F5 336 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 CDC73Q6P1J9 531 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 PAOXQ6QHF9 649 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 BNC2Q6ZN30 1099 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 MIER2Q8N344 545 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 TMEM251Q8N6I4 163 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 OR4A15Q8NGL6 344 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 SLC9A6Q92581 669 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 OTUB1Q96FW1 271 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 TMEM41AQ96HV5 264 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 ZNF597Q96LX8 424 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 RILPQ96NA2 401 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 STACQ99469 402 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 ZBTB18Q99592 522 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 OSBPL11Q9BXB4 747 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 SERHL2Q9H4I8 314 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 NPHS2Q9NP85 383 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 GIN1Q9NXP7 522 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 SEC14L3Q9UDX4 400 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 BOKQ9UMX3 212 aaPredicted RBP14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 NPIPA1Q9UND3 350 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 HRH3Q9Y5N1 445 aa14.19□□□□□ -0.14
RABGGTA-219ENST00000560871 POLEQ07864 2286 aa14.18□□□□□ -0.14
RABGGTA-219ENST00000560871 A0A1B0GUH1 482 aa14.18□□□□□ -0.14
RABGGTA-219ENST00000560871 A1L4Q6 167 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms