RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 OR10Q1Q8NGQ4 319 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 NEIL3Q8TAT5 605 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 GPR151Q8TDV0 419 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 CA5BP1Q8WTZ4 195 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 SLC9A6Q92581 669 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 JADE3Q92613 823 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 TMEM41AQ96HV5 264 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 QPCTLQ9NXS2 382 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 NOP53Q9NZM5 478 aaKnown RBP11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 CBLCQ9ULV8 474 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 C15orf41Q9Y2V0 281 aa11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 SPTAN1Q13813 2472 aaKnown RBP11.87□□□□□ -0.51
CTDSPL2-209ENST00000560620 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 A0A1B0GVC2 190 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 CFLARO15519 480 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 TBX19O60806 448 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 KCNH1O95259 989 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 KITP10721 976 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 G6PDP11413 515 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 PRPS1L1P21108 318 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 GABRA3P34903 492 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 GCKP35557 465 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 PNLIPRP2P54317 469 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 PSMD4P55036 377 aaKnown RBP11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 PRR5P85299 388 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 PMPCAQ10713 525 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 GAB1Q13480 694 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 SPDYE7PQ495Y7 208 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 CYP27C1Q4G0S4 372 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 ATG16L1Q676U5 607 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 TIGD3Q6B0B8 471 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 KRTCAP2Q8N6L1 136 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 CEP70Q8NHQ1 597 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 FBXO30Q8TB52 745 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 SDCCAG3Q96C92 435 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 SLC35A4Q96G79 324 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 SORT1Q99523 831 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 AKTIPQ9H8T0 292 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 ACKR4Q9NPB9 350 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZCCHC3Q9NUD5 404 aaKnown RBP11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 PNPOQ9NVS9 261 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 ARGLU1Q9NWB6 273 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 ATP6V1HQ9UI12 483 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 DNAJC13O75165 2243 aa11.86□□□□□ -0.51
CTDSPL2-209ENST00000560620 ADAM10O14672 748 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 EMC8O43402 210 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 SCO2O43819 266 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 TSPAN2O60636 221 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 CBR3O75828 277 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 LAMP1P11279 417 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 CYP4B1P13584 511 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 ACVR2AP27037 513 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 HTR1EP28566 365 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 CLK3P49761 638 aaKnown RBP11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 EMX2Q04743 252 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 ART3Q13508 389 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 EMC4Q5J8M3 183 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 WIPI1Q5MNZ9 446 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 FNDC7Q5VTL7 733 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 ZNF787Q6DD87 383 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR5M10Q6IEU7 315 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 TRIM42Q8IWZ5 723 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 OR14L1PQ8NHC6 308 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 PHF10Q8WUB8 498 aaKnown RBP11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 PIK3R3Q92569 461 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 RND1Q92730 232 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 RMND5BQ96G75 393 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 MS4A4EQ96PG1 132 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 DMRTA2Q96SC8 542 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 YIPF4Q9BSR8 244 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 SERHLQ9NQF3 203 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 SPRR3Q9UBC9 169 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 MARCOQ9UEW3 520 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 SLC6A5Q9Y345 797 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 HRH3Q9Y5N1 445 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 WIF1Q9Y5W5 379 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 DOPEY1Q5JWR5 2465 aa11.85□□□□□ -0.51
CTDSPL2-209ENST00000560620 SNPHO15079 494 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 WDR1O75083 606 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 PSMG1O95456 288 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 CLDN14O95500 239 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 LBPP18428 481 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 AGAP20933 346 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 ENDOUP21128 410 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 TCEA1P23193 301 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 PTPN6P29350 595 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 EVI2BP34910 448 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 SOAT1P35610 550 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 DCTP40126 519 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 PTGDSP41222 190 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 FRKP42685 505 aaPredicted RBP11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 STX5Q13190 355 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 TP53BP2Q13625 1128 aa11.84□□□□□ -0.51
CTDSPL2-209ENST00000560620 SMU1Q2TAY7 513 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms