RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 SENP1Q9P0U3 644 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 HEY2Q9UBP5 337 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 SLC12A4Q9UP95 1085 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 ACOT9Q9Y305 439 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 TSC22D4Q9Y3Q8 395 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 OR10H1Q9Y4A9 318 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
CDC42BPB-207ENST00000560492 FRG2CA6NGY1 282 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR6C70A6NIJ9 312 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 FOXE1O00358 373 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 GMFGO60234 142 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 SIX3O95343 332 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 ALDOAP04075 364 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 PCSK2P16519 638 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 HK1P19367 917 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 S1PR1P21453 382 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 CASQ1P31415 396 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 KIR2DL2P43627 348 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 PPICP45877 212 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 DSCR4P56555 118 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 RPS3AP61247 264 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 IRF9Q00978 393 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 MAP4K2Q12851 820 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 EFR3AQ14156 821 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 FGFBP1Q14512 234 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 PON3Q15166 354 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 UAP1Q16222 522 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 CLEC12BQ2HXU8 276 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 TRMT12Q53H54 448 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 BEX5Q5H9J7 111 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 SH2D4BQ5SQS7 431 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 SLC48A1Q6P1K1 146 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 PODNL1Q6PEZ8 512 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 SYT10Q6XYQ8 523 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 GBP7Q8N8V2 638 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 OR5M1Q8NGP8 315 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 FNDC9Q8TBE3 224 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 WDR20Q8TBZ3 569 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 GTPBP3Q969Y2 492 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 EFHD2Q96C19 240 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 FAIM2Q9BWQ8 316 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 DSN1Q9H410 356 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 ELOVL6Q9H5J4 265 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 NOL11Q9H8H0 719 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 YAE1D1Q9NRH1 226 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 GMPR2Q9P2T1 348 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 PCDHA9Q9Y5H5 950 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 TNPO3Q9Y5L0 923 aaKnown RBP9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 CR1P17927 2039 aa9.46□□□□□ -0.9
CDC42BPB-207ENST00000560492 PCNX3Q9H6A9 2034 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 A0A087X1B8 175 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 FAM159BA6NKW6 160 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 H0YC42 278 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 EMC8O43402 210 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 NME6O75414 186 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 CBX7O95931 251 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ATP1B1P05026 303 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 DRD5P21918 477 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 PAFAH1B1P43034 410 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 TPD52P55327 224 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 CTBP2P56545 445 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 CORO7P57737 925 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ETF1P62495 437 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 MRPS22P82650 360 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 MRPS25P82663 173 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 OCRLQ01968 901 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ZNF155Q12901 538 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 BCL2A1Q16548 175 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 FRG2Q64ET8 278 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 COMMD6Q7Z4G1 85 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 SLC44A2Q8IWA5 706 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 PHC2Q8IXK0 858 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 KIF18AQ8NI77 898 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 KAT2AQ92830 837 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 CAVIN3Q969G5 261 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 GFM2Q969S9 779 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 PHF21BQ96EK2 531 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 TRMT61AQ96FX7 289 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 PLPPR2Q96GM1 343 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 FRG2BQ96QU4 278 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 USB1Q9BQ65 265 aaKnown RBP9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 PTGES2Q9H7Z7 377 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ANKRA2Q9H9E1 313 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 FANCFQ9NPI8 374 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ADAM29Q9UKF5 820 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 CLEC4AQ9UMR7 237 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 EMC9Q9Y3B6 208 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ROS1P08922 2347 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 ATRQ13535 2644 aa9.45□□□□□ -0.9
CDC42BPB-207ENST00000560492 SONP18583 2426 aaKnown RBP9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 C17orf51A8MQB3 221 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 CCDC188H7C350 402 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 HS3ST1O14792 307 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 CLOCKO15516 846 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 PLAUP00749 431 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 CD8BP10966 210 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 FCGR2AP12318 317 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 MTHFD2P13995 350 aa9.44□□□□□ -0.9
CDC42BPB-207ENST00000560492 STX2P32856 288 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms