RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ACVR2AP27037 513 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 FRKP42685 505 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 ABCE1P61221 599 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 GAB1Q13480 694 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 TOMM20Q15388 145 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 PDCD2Q16342 344 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 ATP6AP1LQ52LC2 224 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 WIPI1Q5MNZ9 446 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 BEND6Q5SZJ8 279 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 DCST1Q5T197 706 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 IL23RQ5VWK5 629 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 OR5M10Q6IEU7 315 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 SLC30A6Q6NXT4 461 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 TMEM81Q6P7N7 255 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 YRDCQ86U90 279 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 KRTCAP2Q8N6L1 136 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 ANKRD42Q8N9B4 389 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 WDSUB1Q8N9V3 476 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 OR1J4Q8NGS1 313 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 RNF138Q8WVD3 245 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 SARAFQ96BY9 339 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 TUBGCP3Q96CW5 907 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 EQTNQ9NQ60 294 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 ALKBH4Q9NXW9 302 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 RNF6Q9Y252 685 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 OR10H1Q9Y4A9 318 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 KLF2Q9Y5W3 355 aaPredicted RBP10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 ACTL7BQ9Y614 415 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 ARHGAP21Q5T5U3 1957 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 KIAA1549Q9HCM3 1950 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 POLQO75417 2590 aa10.63□□□□□ -0.71
RABGGTA-216ENST00000560243 C15orf38-AP3S2A0A0A6YYH1 394 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 GXYLT2A0PJZ3 443 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 TMEM120BA0PK00 339 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 TMEM114B3SHH9 223 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 SCAMP2O15127 329 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 SLITRK5O94991 958 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 ZWINTO95229 277 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 CLDN14O95500 239 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 IGKV1D-16P01601 117 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 SNRPB2P08579 225 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 GLI4P10075 376 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 LAMP1P11279 417 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 CYP4B1P13584 511 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 IL12BP29460 328 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 GPC1P35052 558 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 KIR3DL1P43629 444 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 ASMTP46597 345 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 SLC1A6P48664 564 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 PRKAG1P54619 331 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 GAS1P54826 345 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 MANFP55145 182 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 WNT3P56703 355 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 CRYZQ08257 329 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 SNTA1Q13424 505 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 WLSQ5T9L3 541 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 FNDC5Q8NAU1 212 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 FAM83FQ8NEG4 500 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 FBXO30Q8TB52 745 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 PIK3R3Q92569 461 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 MARVELD3Q96A59 401 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 TMCO6Q96DC7 493 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 ZBED6CLQ96FA7 236 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 OTUB1Q96FW1 271 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 TIMP4Q99727 224 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 PAIP2Q9BPZ3 127 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 TTYH2Q9BSA4 534 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 LMF2Q9BU23 707 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 RTN4RQ9BZR6 473 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 UCK2Q9BZX2 261 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 SIRT3Q9NTG7 399 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 PNPOQ9NVS9 261 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 ATP6V1HQ9UI12 483 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 FBXL2Q9UKC9 423 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 RAP2CQ9Y3L5 183 aa10.62□□□□□ -0.71
RABGGTA-216ENST00000560243 CREBBPQ92793 2442 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 FIGNL2A6NMB9 653 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 SCO2O43819 266 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 FADS1O60427 444 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 ABCB7O75027 752 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 MYZAPP0CAP1 466 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 G6PDP11413 515 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 PRPS2P11908 318 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 BMP7P18075 431 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 ELAVL4P26378 380 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 MAPK1P28482 360 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 GABRA3P34903 492 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 KRT20P35900 424 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 HPCAL1P37235 193 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 ADH7P40394 386 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 MAP3K8P41279 467 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 RFX3P48380 749 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 PNLIPRP2P54317 469 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 BST1Q10588 318 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 STX3Q13277 289 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 EFR3AQ14156 821 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 CYP27C1Q4G0S4 372 aa10.61□□□□□ -0.71
RABGGTA-216ENST00000560243 C1orf185Q5T7R7 199 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms