RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PKLRP30613 574 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 GCGRP47871 477 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 YIF1BQ5BJH7 314 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 ANKRD9Q96BM1 317 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 MYO18AQ92614 2054 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 B4DXG7 233 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SCO2O43819 266 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 DPM1O60762 260 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 HNRNPH3P31942 346 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 EFNA3P52797 238 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLCXD2Q0VAA5 305 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC14A1Q13336 389 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARL14EPQ8N8R7 260 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 UBL7Q96S82 380 aaPredicted RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR51J1Q9H342 316 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 CEP152O94986 1710 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 SPATA31E1Q6ZUB1 1445 aa13.2□□□□□ -0.3
CSPG4P12-202ENST00000559989 YY2O15391 372 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 KDELR3O43731 214 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 HBG1P69891 147 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 HBG2P69892 147 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 AVPI1Q5T686 147 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR5L1Q8NGL2 311 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 ACDQ96AP0 544 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR6C2Q9NZP2 312 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 CPNE7Q9UBL6 633 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM189A1O60320 539 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 SYPP08247 313 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 MMP3P08254 477 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 GAREM2Q75VX8 874 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 IL17RDQ8NFM7 739 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR51A7Q8NH64 312 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 CMTM2Q8TAZ6 248 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 FCRL5Q96RD9 977 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 IL17RBQ9NRM6 502 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 DVL2O14641 736 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PPP1R8Q12972 351 aaKnown RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 NPRL3Q12980 569 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLA2G7Q13093 441 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PRRT3Q5FWE3 981 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR5L2Q8NGL0 311 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 M1APQ8TC57 530 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 NKX1-2Q9UD57 310 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM96BQ9Y3D0 163 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM155AB1AL88 458 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 EMC8O43402 210 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 LILRB3O75022 631 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 TOX4O94842 621 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 AK1P00568 194 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 ALPIP09923 528 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 TICAM1Q8IUC6 712 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 SYNPRQ8TBG9 265 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC16A10Q8TF71 515 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 NICN1Q9BSH3 213 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 KATNB1Q9BVA0 655 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 FKTNO75072 461 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 ADH1BP00325 375 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 C4BPAP04003 597 aaKnown RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 P04436 131 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR10J4P0C629 311 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 SELPP16109 830 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 BAMBIQ13145 260 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 TMEM198Q66K66 360 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR4N2Q8NGD1 307 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PCED1BQ96HM7 432 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR10A5Q9H207 317 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR10A2Q9H208 303 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PLAGL1Q9UM63 463 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 PCDHB10Q9UN67 800 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 POMT1Q9Y6A1 747 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 GGT1P19440 569 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 CLCNKBP51801 687 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM214AQ32MH5 1076 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 UBE2NLQ5JXB2 153 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 HIST2H3AQ71DI3 136 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 MAMDC2Q7Z304 686 aaPredicted RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 GATSQ8NAP1 163 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR5D14Q8NGL3 314 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 CWH43Q9H720 699 aa13.19□□□□□ -0.3
CSPG4P12-202ENST00000559989 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 RFXAPO00287 272 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SHMT2P34897 504 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MTNR1AP48039 350 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 GSK3AP49840 483 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 DAP3P51398 398 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 DNAJB13P59910 316 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 CRYZQ08257 329 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 BTN1A1Q13410 526 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 FRS2Q8WU20 508 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SIDT1Q9NXL6 827 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MYOTQ9UBF9 498 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms