RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TNIP2Q8NFZ5 429 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 OR14L1PQ8NHC6 308 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 CAVIN3Q969G5 261 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-208ENST00000558827 ELP4Q96EB1 424 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 C3orf30Q96M34 536 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 TRIB1Q96RU8 372 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 SECISBP2Q96T21 854 aaKnown RBP11.41□□□□□ -0.58
SMAD3-208ENST00000558827 YIPF4Q9BSR8 244 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 C1orf50Q9BV19 199 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 DDX18Q9NVP1 670 aaKnown RBP11.41□□□□□ -0.58
SMAD3-208ENST00000558827 MKS1Q9NXB0 559 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 QPCTLQ9NXS2 382 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 TAS2R9Q9NYW1 312 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 ZDHHC2Q9UIJ5 367 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 ITGB1BP2Q9UKP3 347 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 RPH3AQ9Y2J0 694 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-208ENST00000558827 CCDC168Q8NDH2 2452 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 OR6C70A6NIJ9 312 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 B4DXG7 233 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 H3BQF6 201 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 LSM1O15116 133 aaKnown RBP11.4□□□□□ -0.58
SMAD3-208ENST00000558827 PDPK1O15530 556 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 ITM2AO43736 263 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-208ENST00000558827 NPHS1O60500 1241 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 BPGMP07738 259 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 BCKDHAP12694 445 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 GABRA3P34903 492 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 PSG6Q00889 435 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF844Q08AG5 666 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 UGT3A2Q3SY77 523 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 ACSF3Q4G176 576 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-208ENST00000558827 NUDCD3Q8IVD9 361 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 TRIM42Q8IWZ5 723 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 CLYBLQ8N0X4 340 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 CNPY4Q8N129 248 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 NAXEQ8NCW5 288 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 OR5M1Q8NGP8 315 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 PPP1R14CQ8TAE6 165 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 FAM76AQ8TAV0 307 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 PIK3R3Q92569 461 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 PPCDCQ96CD2 204 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 TMCO6Q96DC7 493 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 WDYHV1Q96HA8 205 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 RTN4RQ9BZR6 473 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 DSN1Q9H410 356 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 REEP4Q9H6H4 257 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 MED11Q9P086 117 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 C19orf53Q9UNZ5 99 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-208ENST00000558827 SPG11Q96JI7 2443 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 ADGRG4Q8IZF6 3080 aa11.4□□□□□ -0.58
SMAD3-208ENST00000558827 AKAP6Q13023 2319 aa11.4□□□□□ -0.59
SMAD3-208ENST00000558827 CSMD1Q96PZ7 3565 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 MPDZO75970 2070 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 RGS16O15492 202 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-208ENST00000558827 CTIFO43310 598 aaKnown RBP11.39□□□□□ -0.59
SMAD3-208ENST00000558827 COQ9O75208 318 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 GABRA1P14867 456 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 BMP5P22003 454 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 PRPH2P23942 346 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 GRK2P25098 689 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 GSTM5P46439 218 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 RNF144AP50876 292 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-208ENST00000558827 MANFP55145 182 aaKnown RBP11.39□□□□□ -0.59
SMAD3-208ENST00000558827 DLX5P56178 289 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 TLE4Q04727 773 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 TFF3Q07654 80 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 EFR3AQ14156 821 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 VASNQ6EMK4 673 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 PLCZ1Q86YW0 608 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 OR7A2PQ8NGA2 310 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 NTNG2Q96CW9 530 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 RMND5BQ96G75 393 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-208ENST00000558827 SLC35A4Q96G79 324 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 C16orf58Q96GQ5 468 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 LURAP1Q96LR2 239 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 TRMOQ9BU70 441 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 ENKD1Q9H0I2 346 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 EML4Q9HC35 981 aaKnown RBP11.39□□□□□ -0.59
SMAD3-208ENST00000558827 KCNK9Q9NPC2 374 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 TAS2R10Q9NYW0 307 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 TAS2R7Q9NYW3 318 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 DKKL1Q9UK85 242 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 CBLCQ9ULV8 474 aa11.39□□□□□ -0.59
SMAD3-208ENST00000558827 PDZD2O15018 2839 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 A0A087WV62 115 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 ESPNB1AK53 854 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 TYROBPO43914 113 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 CBR3O75828 277 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 IGKV1D-16P01601 117 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 FGF4P08620 206 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 NEFHP12036 1026 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 ELAVL4P26378 380 aaKnown RBP11.38□□□□□ -0.59
SMAD3-208ENST00000558827 UQCRC1P31930 480 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 PTGER4P35408 488 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 SERPINB4P48594 390 aa11.38□□□□□ -0.59
SMAD3-208ENST00000558827 PNLIPRP2P54317 469 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms