RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NBPF19A0A087WUL8 3843 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 A0A087WV62 115 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 LOC102723996A0A087X1L8 192 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 IGHV1-45A0A0A0MS14 117 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CCDC189A1A4V9 331 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 GLOD5A6NK44 160 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 AQP12BA6NM10 295 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 A8MVJ9 347 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 MAGEB17A8MXT2 336 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 C9J4A7 227 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 G3V2L1 256 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 M0R3H8 397 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 E2F3O00716 465 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 UBFD1O14562 309 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 PGRMC2O15173 223 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 KLK8O60259 260 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 LDB3O75112 727 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 SPAG7O75391 227 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 EEDO75530 441 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 OR4F21O95013 312 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 NSA2O95478 260 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 PRR35P0CG20 571 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 PCNAP12004 261 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 EZRP15311 586 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 GNLYP22749 145 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ITGA3P26006 1051 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CERS1P27544 350 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CRABP2P29373 138 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 EEF1DP29692 281 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 ARRB2P32121 409 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 STX2P32856 288 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 HSD17B3P37058 310 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 GPR143P51810 404 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 FOXA1P55317 472 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 HNRNPH2P55795 449 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 AP1S2P56377 157 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 PROK1P58294 105 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ATP6V0D1P61421 351 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 RPS15AP62244 130 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 RPS13P62277 151 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 MC1RQ01726 317 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 IRF8Q02556 426 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 DDX39BQ13838 428 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 GTF2H2Q13888 395 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 FAM53BQ14153 422 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 RBBP7Q16576 425 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 EIF2S3LQ2VIR3 472 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 GLE1Q53GS7 698 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 LACTB2Q53H82 288 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 SFT2D3Q587I9 215 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 C10orf62Q5T681 223 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 MFSD4BQ5TF39 518 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 C18orf63Q68DL7 685 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 LRRC8EQ6NSJ5 796 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 JMJD6Q6NYC1 403 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 GTF2H2CQ6P1K8 395 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 TMIGD1Q6UXZ0 262 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 FRA10AC1Q70Z53 315 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 NDUFAF7Q7L592 441 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 GOLGA7Q7Z5G4 137 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 BCDIN3DQ7Z5W3 292 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 KRT73Q86Y46 540 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 IFT20Q8IY31 132 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 RAB42Q8N4Z0 105 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 PTGR2Q8N8N7 351 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 TEX19Q8NA77 164 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ZNF527Q8NB42 609 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CAMKVQ8NCB2 501 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 PLPP5Q8NEB5 264 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 MNS1Q8NEH6 495 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 NFAM1Q8NET5 270 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 OR7G3Q8NG95 312 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 STAG3L4Q8TBR4 150 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 NT5CQ8TCD5 201 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 TRPC4APQ8TEL6 797 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 THAP4Q8WY91 577 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ANKRD7Q92527 254 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CDKL2Q92772 493 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 RERGQ96A58 199 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 ANKRD9Q96BM1 317 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 SNRNP40Q96DI7 357 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 VPS50Q96JG6 964 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CATSPER2Q96P56 530 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 SNX18Q96RF0 628 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 TAAR6Q96RI8 345 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 KCNA7Q96RP8 456 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 HBEGFQ99075 208 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 MTERF1Q99551 399 aaKnown RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 HAUS8Q9BT25 410 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 ZNF717Q9BY31 904 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 PARD6BQ9BYG5 372 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 DRC3Q9H069 523 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 CDCP1Q9H5V8 836 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 EPS8L2Q9H6S3 715 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 PELI2Q9HAT8 420 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 NMRAL1Q9HBL8 299 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 POPDC3Q9HBV1 291 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 OBP2BQ9NPH6 170 aa3.94□□□□□ -1.78
SPG11-211ENST00000558561 SEMA4BQ9NPR2 832 aaPredicted RBP3.94□□□□□ -1.78
SPG11-211ENST00000558561 ASF1BQ9NVP2 202 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms