RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 C21orf58P58505 322 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 PCOLCEQ15113 449 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 MOGQ16653 247 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 ZNF829Q3KNS6 432 aaPredicted RBP9.61□□□□□ -0.87
TPM1-212ENST00000558347 ADPRMQ3LIE5 342 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 TMEM35AQ53FP2 167 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 CRB2Q5IJ48 1285 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 AGAP7PQ5VUJ5 663 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 GPR107Q5VW38 600 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 KHDRBS2Q5VWX1 349 aaKnown RBP9.61□□□□□ -0.87
TPM1-212ENST00000558347 NOXRED1Q6NXP6 359 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 ENPP6Q6UWR7 440 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 NDUFAF7Q7L592 441 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 CISD2Q8N5K1 135 aaKnown RBP9.61□□□□□ -0.87
TPM1-212ENST00000558347 FBXO30Q8TB52 745 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 NT5CQ8TCD5 201 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 FBLIM1Q8WUP2 373 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 TM9SF4Q92544 642 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 FAM120BQ96EK7 910 aaKnown RBP9.61□□□□□ -0.87
TPM1-212ENST00000558347 PYURFQ96I23 114 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 AGAP4Q96P64 663 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 SPATA9Q9BWV2 254 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 VN1R1Q9GZP7 353 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 LIN28AQ9H9Z2 209 aaKnown RBP9.61□□□□□ -0.87
TPM1-212ENST00000558347 GALNT8Q9NY28 637 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 AHSPQ9NZD4 102 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 MKL2Q9ULH7 1088 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 MAPRE3Q9UPY8 281 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 NAALAD2Q9Y3Q0 740 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 HSPE1-MOB4S4R3N1 261 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 V9GYQ6 96 aa9.61□□□□□ -0.87
TPM1-212ENST00000558347 LOC102723996A0A087X1L8 192 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 LRIT2A6NDA9 550 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 GNGT2O14610 69 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 NDUFS4O43181 175 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 MRPS14O60783 128 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 MYO1DO94832 1006 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 B3GALT4O96024 378 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 CCDC159P0C7I6 412 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SLC35G6P0C7Q6 338 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SDC1P18827 310 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 EEF1B2P24534 225 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 TIA1P31483 386 aaKnown RBP eCLIP9.6□□□□□ -0.875e-8■□□□□ 8.7
TPM1-212ENST00000558347 XCR1P46094 333 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 TPD52P55327 224 aaPredicted RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 RAE1P78406 368 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 MRPL49Q13405 166 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 ERICH5Q6P6B1 374 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SHQ1Q6PI26 577 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 LINC00696Q6ZRV3 163 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 LINC00299Q6ZSB3 139 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 LANCL3Q6ZV70 420 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SERPINA11Q86U17 422 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 FAM26EQ8N5C1 309 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 C1orf52Q8N6N3 182 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 SETD9Q8NE22 299 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 CHDHQ8NE62 594 aaPredicted RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 OR5T3Q8NGG3 340 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 OR51Q1Q8NH59 317 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 TBC1D15Q8TC07 691 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 PSMF1Q92530 271 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 WDR77Q9BQA1 342 aaPredicted RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 OR51B5Q9H339 312 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 IKZF5Q9H5V7 419 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 ANKHQ9HCJ1 492 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SERHLQ9NQF3 203 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 TBC1D23Q9NUY8 699 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 ASF1BQ9NVP2 202 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 ADAM29Q9UKF5 820 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SAMD4AQ9UPU9 718 aaKnown RBP9.6□□□□□ -0.87
TPM1-212ENST00000558347 DLGAP4Q9Y2H0 992 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 NTNG1Q9Y2I2 539 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 PCDHB14Q9Y5E9 798 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 PCDHGA10Q9Y5H3 936 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 SLC22A7Q9Y694 548 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 DOPEY2Q9Y3R5 2298 aa9.6□□□□□ -0.87
TPM1-212ENST00000558347 IGHV3-20A0A0C4DH32 117 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 ZNF860A6NHJ4 632 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 EVPLLA8MZ36 301 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 PFDN1O60925 122 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 DNAJB6O75190 326 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 PRKD3O94806 890 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 SERPIND1P05546 499 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 INHBBP09529 407 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 C8orf89P0DMQ9 161 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 ELK4P28324 431 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 PTPN6P29350 595 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 SOX11P35716 441 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 DCTP40126 519 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
TPM1-212ENST00000558347 SRSF11Q05519 484 aaKnown RBP9.59□□□□□ -0.87
TPM1-212ENST00000558347 HYAL2Q12891 473 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 MFAP5Q13361 173 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 NEDD8Q15843 81 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 ZIK1Q3SY52 487 aaPredicted RBP9.59□□□□□ -0.87
TPM1-212ENST00000558347 MINDY4Q4G0A6 757 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 MFSD4BQ5TF39 518 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 ZNF691Q5VV52 312 aa9.59□□□□□ -0.87
TPM1-212ENST00000558347 GTF2IRD2BQ6EKJ0 949 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms