RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 FIGNL1Q6PIW4 674 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GPAT4Q86UL3 456 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 DNASE1L2Q92874 299 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ZBED3Q96IU2 234 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SEC61A1P61619 476 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RPL23AP62750 156 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 SLC27A4Q6P1M0 643 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 PRSS42Q7Z5A4 293 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 OR1M1Q8NGA1 313 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 FBXO8Q9NRD0 319 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GOLT1BQ9Y3E0 138 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RNF215Q9Y6U7 377 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 PLCE1Q9P212 2302 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 KCNK5O95279 499 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 PDGFBP01127 241 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CCR9P51686 369 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GPLD1P80108 840 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CTU2Q2VPK5 515 aaKnown RBP3.51□□□□□ -1.85
ATXN3-248ENST00000558190 DCST2Q5T1A1 773 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 FAM58AQ8N1B3 248 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 ARNTL2Q8WYA1 636 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 FAM46BQ96A09 425 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RIMS2Q9UQ26 1411 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CLDN7O95471 211 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 DLSTP36957 453 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RAB30Q15771 203 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM268Q5VZI3 342 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GPR139Q6DWJ6 353 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 P4HA3Q7Z4N8 544 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 HAO2Q9NYQ3 351 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 COLEC10Q9Y6Z7 277 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 PRAF2O60831 178 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 APOFQ13790 326 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 RPE65Q16518 533 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GPR162Q16538 588 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM71Q6P5X7 295 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 CLEC9AQ6UXN8 241 aa3.51□□□□□ -1.85
ATXN3-248ENST00000558190 GPR89AB7ZAQ6 455 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GPR89BP0CG08 455 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 AKT2P31751 481 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GLP1RP43220 463 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SNRPGP62308 76 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GPR33Q49SQ1 333 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CATSPERGQ6ZRH7 1159 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR4N5Q8IXE1 308 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 KLHDC8BQ8IXV7 354 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DBF4BQ8NFT6 615 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RNF141Q8WVD5 230 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 FRZBQ92765 325 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ARHGDIGQ99819 225 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF251Q9BRH9 671 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZBTB20Q9HC78 741 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DZANK1Q9NVP4 752 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DUS2Q9NX74 493 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CCDC163A0A0D9SF12 145 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ELK1P19419 428 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SMAD3P84022 425 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GTDC1Q4AE62 458 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CLRN3Q8NCR9 226 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ARRDC4Q8NCT1 418 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LPPQ93052 612 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 C19orf12Q9NSK7 152 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 AIG1Q9NVV5 245 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 RIPK3Q9Y572 518 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 MED6O75586 246 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 H2BFMP0C1H6 154 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 TNFRSF1BP20333 461 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LILRA4P59901 499 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLC30A3Q99726 388 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 IL10RBQ08334 325 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 EIF2B1Q14232 305 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLX4IPQ5VYV7 408 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ARRDC2Q8TBH0 407 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 IL21RQ9HBE5 538 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PTTG3PQ9NZH4 202 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 IL20RAQ9UHF4 553 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 TCF21O43680 179 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 KDELR3O43731 214 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLC35E2BP0CK96 405 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF10P21506 573 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 GP2P55259 537 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CRYZQ08257 329 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 IQCHQ86VS3 1027 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 KCNRGQ8N5I3 272 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 NANOGP1Q8N7R0 232 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR4F15Q8NGB8 312 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SPNS1Q9H2V7 528 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 CFL1P23528 166 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 PPT1P50897 306 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 HOXC5Q00444 222 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR5AK3PQ8NH89 298 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 HS6ST2Q96MM7 605 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ALOXE3Q9BYJ1 711 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 ZCCHC2Q9C0B9 1178 aaKnown RBP3.5□□□□□ -1.85
ATXN3-248ENST00000558190 OR52A5Q9H2C5 316 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 B4DXG7 233 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DVL1O14640 695 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 LPLP06858 475 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 SLC6A6P31641 620 aa3.5□□□□□ -1.85
ATXN3-248ENST00000558190 DOC2AQ14183 400 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms