RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 OR56B2PQ8NGI1 322 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 OR4L1Q8NH43 312 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 RDH11Q8TC12 318 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 RPGRIP1Q96KN7 1286 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CCT8L2Q96SF2 557 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 C19orf43Q9BQ61 176 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 NTMT1Q9BV86 223 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CACNG6Q9BXT2 260 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 TEX13AQ9BXU3 409 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 GLT8D2Q9H1C3 349 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 SLC26A1Q9H2B4 701 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 EHD1Q9H4M9 534 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 AKIRIN1Q9H9L7 192 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 TRPV5Q9NQA5 729 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 NMRK1Q9NWW6 199 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 BARX2Q9UMQ3 279 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 DIMT1Q9UNQ2 313 aaKnown RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 PIN4Q9Y237 131 aaKnown RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 ATG4BQ9Y4P1 393 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 KDRP35968 1356 aa2.4□□□□□ -2.02
SPG11-206ENST00000558093 A0A1W2PRV1 198 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 GPR89AB7ZAQ6 455 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 H0YCG3 227 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 SMC2O95347 1197 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 FCER2P06734 321 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 SFTPBP07988 381 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 GPR89BP0CG08 455 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 SLC35E2P0CK97 266 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 UROSP10746 265 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 GHRP10912 638 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 MGMTP16455 207 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CCNA2P20248 432 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CTNNB1P35222 781 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 TCF7P36402 384 aaPredicted RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 DHPSP49366 369 aaPredicted RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 SERPINH1P50454 418 aaKnown RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 STX1BP61266 288 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 KLF5Q13887 457 aaPredicted RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 RCN2Q14257 317 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 KIAA0040Q15053 153 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 STK11Q15831 433 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 QRICH1Q2TAL8 776 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 C2orf83Q53S99 150 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 TOR1AIP1Q5JTV8 583 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 TCHHL1Q5QJ38 904 aaPredicted RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 PRAMEF8Q5VWM4 474 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CDC42EP5Q6NZY7 148 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CLEC2AQ6UVW9 174 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 RABEPKQ7Z6M1 372 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 UNC5CLQ8IV45 518 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 UBQLNLQ8IYU4 475 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 FAM9CQ8IZT9 166 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 KRT222Q8N1A0 295 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 OR52K1Q8NGK4 314 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 FIBINQ8TAL6 211 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 RAPGEF5Q92565 580 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 NRBF2Q96F24 287 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 TTC25Q96NG3 672 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CASD1Q96PB1 797 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 SH3GL1Q99961 368 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 GCOM2Q9BZD3 368 aaPredicted RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 STMN4Q9H169 189 aaPredicted RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 GANQ9H2C0 597 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 DPH5Q9H2P9 285 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 DCLRE1BQ9H816 532 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 TMEM165Q9HC07 324 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 SLC35D1Q9NTN3 355 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 DNAJC11Q9NVH1 559 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 ANO10Q9NW15 660 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CNIH4Q9P003 139 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 TRPC4Q9UBN4 977 aa2.4□□□□□ -2.03
SPG11-206ENST00000558093 CHTOPQ9Y3Y2 248 aaKnown RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 SPAG9O60271 1321 aaKnown RBP2.4□□□□□ -2.03
SPG11-206ENST00000558093 RNF103-CHMP3A0A140T963 221 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 FRG2CA6NGY1 282 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 A8MX80 341 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 CETN3O15182 167 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 RNF113AO15541 343 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 ATP6V1G1O75348 118 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 FLOT1O75955 427 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 GJB5O95377 273 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 YEATS4O95619 227 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 PNPP00491 289 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 POLR2MP0CAP2 368 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 PVRP15151 417 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 TAGLN2P37802 199 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 ACAA2P42765 397 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 MAGEA4P43358 317 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 ACADSBP45954 432 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 OR1G1P47890 313 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 PITPNBP48739 271 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 ARHGDIBP52566 201 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 GBX2P52951 348 aaPredicted RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 HAND2P61296 217 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 SARNPP82979 210 aaKnown RBP2.39□□□□□ -2.03
SPG11-206ENST00000558093 CD47Q08722 323 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 PLD1Q13393 1074 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 RIPK1Q13546 671 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 SERTAD2Q14140 314 aa2.39□□□□□ -2.03
SPG11-206ENST00000558093 MORF4L2Q15014 288 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms