RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 WWTR1Q9GZV5 400 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 IKZF5Q9H5V7 419 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 CCDC86Q9H6F5 360 aaKnown RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 MTHFD2LQ9H903 347 aaPredicted RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 ABI3Q9P2A4 366 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 SLC7A8Q9UHI5 535 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 PRDM4Q9UKN5 801 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 CBLCQ9ULV8 474 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 ZNF232Q9UNY5 417 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 SAMD4AQ9UPU9 718 aaKnown RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 POMPQ9Y244 141 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 GPR55Q9Y2T6 319 aaPredicted RBP11.51□□□□□ -0.57
TPM1-209ENST00000558072 IFT52Q9Y366 437 aa11.51□□□□□ -0.57
TPM1-209ENST00000558072 TRBV11-1A0A0K0K1C0 115 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 A8MVJ9 347 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 CXCR6O00574 342 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 TFPTP0C1Z6 253 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 LIFP15018 202 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 GGT1P19440 569 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 TCN1P20061 433 aaPredicted RBP11.5□□□□□ -0.57
TPM1-209ENST00000558072 PIGAP37287 484 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 CLK3P49761 638 aaKnown RBP11.5□□□□□ -0.57
TPM1-209ENST00000558072 POLE2P56282 527 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 KCNJ2P63252 427 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 CLN3Q13286 438 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 EFR3AQ14156 821 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 SELPLGQ14242 412 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 EBPQ15125 230 aaKnown RBP11.5□□□□□ -0.57
TPM1-209ENST00000558072 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM1-209ENST00000558072 COX20Q5RI15 118 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 LCN8Q6JVE9 175 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 PEX5LQ8IYB4 626 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 CLEC4FQ8N1N0 589 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 ZNF527Q8NB42 609 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 SLC16A11Q8NCK7 471 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 SPPL2AQ8TCT8 520 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 FAM162AQ96A26 154 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 C8orf44Q96CB5 159 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 CCDC124Q96CT7 223 aaKnown RBP11.5□□□□□ -0.57
TPM1-209ENST00000558072 SLC35A4Q96G79 324 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 C16orf58Q96GQ5 468 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 CCNL2Q96S94 520 aaPredicted RBP11.5□□□□□ -0.57
TPM1-209ENST00000558072 UGT2B28Q9BY64 529 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 YY1AP1Q9H869 796 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 FBXL4Q9UKA2 621 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 ANGPTL2Q9UKU9 493 aa11.5□□□□□ -0.57
TPM1-209ENST00000558072 IGHV3-20A0A0C4DH32 117 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 PDE5AO76074 875 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ACP2P11117 423 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 KDELR2P33947 212 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 SOX18P35713 384 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 UCNP55089 124 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 PSG6Q00889 435 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 IL10RAQ13651 578 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 LARS2Q15031 903 aaKnown RBP11.49□□□□□ -0.57
TPM1-209ENST00000558072 ADRM1Q16186 407 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 DUSP5Q16690 384 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 CRB2Q5IJ48 1285 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 DCST2Q5T1A1 773 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ZFP1Q6P2D0 407 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 OPN5Q6U736 354 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 LRRC69Q6ZNQ3 347 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 PTOV1Q86YD1 416 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 GPALPP1Q8IXQ4 340 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 SLC34A3Q8N130 599 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 RNF148Q8N7C7 305 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 OR5D16Q8NGK9 328 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ADAMTS17Q8TE56 1095 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 SLC38A5Q8WUX1 472 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 FIG4Q92562 907 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 CDS1Q92903 461 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 STMN2Q93045 179 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ADIPOR1Q96A54 375 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 TMEM19Q96HH6 336 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ZNF354BQ96LW1 612 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 GAL3ST4Q96RP7 486 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 YIPF4Q9BSR8 244 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ITPAQ9BY32 194 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ZNF160Q9HCG1 818 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 OLAHQ9NV23 265 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 POLHQ9Y253 713 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 YARS2Q9Y2Z4 477 aaKnown RBP11.49□□□□□ -0.57
TPM1-209ENST00000558072 WDR45Q9Y484 360 aa11.49□□□□□ -0.57
TPM1-209ENST00000558072 ACOT8O14734 319 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 ARPC2O15144 300 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 KCNK2O95069 426 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 PGM3O95394 542 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 CLPSP04118 112 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 BCHEP06276 602 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 GPIP06744 558 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 DBIP07108 87 aaKnown RBP11.48□□□□□ -0.57
TPM1-209ENST00000558072 CT45A8P0DMV1 189 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 CT45A9P0DMV2 189 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 HPGDP15428 266 aa11.48□□□□□ -0.57
TPM1-209ENST00000558072 IL12BP29460 328 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms