RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 CBLCQ9ULV8 474 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 ARHGAP21Q5T5U3 1957 aa13.3□□□□□ -0.28
SHMT2-235ENST00000557740 SETD2Q9BYW2 2564 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-235ENST00000557740 SERTM1A2A2V5 107 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 CLCA1A8K7I4 914 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 TSPAN2O60636 221 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 SLITRK5O94991 958 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 JUNP05412 331 aaKnown RBP13.29□□□□□ -0.28
SHMT2-235ENST00000557740 FREM3P0C091 2139 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 TCEA1P23193 301 aaKnown RBP13.29□□□□□ -0.28
SHMT2-235ENST00000557740 DNASE1P24855 282 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 MC3RP41968 323 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 PNLIPRP2P54317 469 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 GFRA1P56159 465 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 SORDQ00796 357 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 C2orf80Q0P641 193 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 SH2D4BQ5SQS7 431 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 OR5M10Q6IEU7 315 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-235ENST00000557740 WNT2BQ93097 391 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 C11orf24Q96F05 449 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-235ENST00000557740 FOXC2Q99958 501 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 MYNNQ9NPC7 610 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 EMCNQ9ULC0 261 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 PLEKHA6Q9Y2H5 1048 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 POLR3HQ9Y535 204 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-235ENST00000557740 MED13LQ71F56 2210 aa13.29□□□□□ -0.28
SHMT2-235ENST00000557740 MED12Q93074 2177 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 A0A087WV62 115 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 FAM221AA4D161 298 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 MYO1GB0I1T2 1018 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 G3V2L1 256 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 H3BQF6 201 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 UBFD1O14562 309 aaKnown RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 SCO2O43819 266 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 RSL1D1O76021 490 aaKnown RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 EPXP11678 715 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 CHMP24386 653 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 DPP4P27487 766 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 EVI2BP34910 448 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 SLCO1A2P46721 670 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 STARP49675 285 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 LHX2P50458 406 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 FOXA1P55317 472 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 DAZAP2Q15038 168 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 ZNHIT3Q15649 155 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 TMEM107Q6UX40 140 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 FRMD7Q6ZUT3 714 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 CDC20BQ86Y33 519 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 GRAMD2AQ8IUY3 354 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 GSPT2Q8IYD1 628 aaKnown RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 GCNT2Q8N0V5 402 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 MZB1Q8WU39 189 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 INTS12Q96CB8 462 aaKnown RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 YIPF4Q9BSR8 244 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 RBM24Q9BX46 236 aaKnown RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 TXLNGYQ9BZA5 131 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 RRAGDQ9NQL2 400 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 DDX18Q9NVP1 670 aaKnown RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 JKAMPQ9P055 326 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 GRID1Q9ULK0 1009 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 RPH3AQ9Y2J0 694 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-235ENST00000557740 ABCA4P78363 2273 aa13.28□□□□□ -0.28
SHMT2-235ENST00000557740 PLOD2O00469 737 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 PROCP04070 461 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 ZNF708P17019 499 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 FOXF2Q12947 444 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 DECR1Q16698 335 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 CCDC153Q494R4 210 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 CYP27C1Q4G0S4 372 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 FAM71E1Q6IPT2 247 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 IKBIPQ70UQ0 350 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 CHMP1BQ7LBR1 199 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 ADGRE4PQ86SQ3 457 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 LUZP2Q86TE4 346 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 OR4N2Q8NGD1 307 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 FAM76AQ8TAV0 307 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 LINC01560Q8TB33 94 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 UCN2Q96RP3 112 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 PIGMQ9H3S5 423 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 LIME1Q9H400 295 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 Q9N2J8 555 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 CLCF1Q9UBD9 225 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 MRTO4Q9UKD2 239 aaKnown RBP13.27□□□□□ -0.29
SHMT2-235ENST00000557740 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 C19orf53Q9UNZ5 99 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-235ENST00000557740 WBP11Q9Y2W2 641 aaKnown RBP13.27□□□□□ -0.29
SHMT2-235ENST00000557740 MRPS18CQ9Y3D5 142 aaKnown RBP13.27□□□□□ -0.29
SHMT2-235ENST00000557740 ITPR3Q14573 2671 aa13.27□□□□□ -0.29
SHMT2-235ENST00000557740 A0A1W2PPM1 405 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 SMIM23A6NLE4 172 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 PLIN3O60664 434 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 RCBTB2O95199 551 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 GOSR1O95249 250 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 CD99P14209 185 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 CCT5P48643 541 aa13.26□□□□□ -0.29
SHMT2-235ENST00000557740 DIO3P55073 304 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms