RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GPR151Q8TDV0 419 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 MAGED4Q96JG8 741 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 BTBD2Q9BX70 525 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 ANGPTL4Q9BY76 406 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 HOXD1Q9GZZ0 328 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 POLE3Q9NRF9 147 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 EXD2Q9NVH0 621 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 CCDC167Q9P0B6 97 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 MAP10Q9P2G4 905 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 BOKQ9UMX3 212 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 SVILO95425 2214 aa12.58□□□□□ -0.39
SHMT2-234ENST00000557703 RNF103-CHMP3A0A140T963 221 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ACOT7O00154 380 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ANP32DO95626 131 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 GABRA3P34903 492 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 PTGER1P34995 402 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 CHI3L1P36222 383 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 DGKQP52824 942 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 CORO7P57737 925 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 POU6F2P78424 691 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 LASP1Q14847 261 aaKnown RBP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 AGKQ53H12 422 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ATAD3BQ5T9A4 648 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SAXO2Q658L1 398 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF324BQ6AW86 544 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 NPSR1Q6W5P4 371 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF621Q6ZSS3 439 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SPATA21Q7Z572 469 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SLC22A16Q86VW1 577 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 FUNDC1Q8IVP5 155 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SULF2Q8IWU5 870 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 CLECL1Q8IZS7 167 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 DPP10Q8N608 796 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 COX18Q8N8Q8 333 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SLC16A11Q8NCK7 471 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 GALNT11Q8NCW6 608 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 RNF138Q8WVD3 245 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 C10orf82Q8WW14 230 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SLC9A6Q92581 669 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 GTF2H4Q92759 462 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 HGDQ93099 445 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 TMBIM1Q969X1 311 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 NTNG2Q96CW9 530 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 FRMD6Q96NE9 622 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SLC35A5Q9BS91 424 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 TRIM4Q9C037 500 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 EPN3Q9H201 632 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 ANKRA2Q9H9E1 313 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 IL1RL2Q9HB29 575 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SERHLQ9NQF3 203 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 KLHL1Q9NR64 748 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 B4GALT7Q9UBV7 327 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 LEF1Q9UJU2 399 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 PRDM4Q9UKN5 801 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.4
SHMT2-234ENST00000557703 CORO2BQ9UQ03 480 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 LIPT1Q9Y234 373 aa12.58□□□□□ -0.4
SHMT2-234ENST00000557703 A0A096LPI6 279 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 BBIP1A8MTZ0 92 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SLC28A2O43868 658 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SNX3O60493 162 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 CPSF4O95639 269 aaKnown RBP12.57□□□□□ -0.4
SHMT2-234ENST00000557703 F10P00742 488 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SNRPB2P08579 225 aaKnown RBP12.57□□□□□ -0.4
SHMT2-234ENST00000557703 EDN3P14138 238 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 MATN1P21941 496 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SOAT1P35610 550 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 CASP3P42574 277 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 MAN2A2P49641 1150 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 GNGT1P63211 74 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 KCNJ2P63252 427 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 FADDQ13158 208 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 GNA13Q14344 377 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 TIGD2Q4W5G0 525 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 LRIF1Q5T3J3 769 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 CGB2Q6NT52 195 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 ANKRD46Q86W74 232 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 ATCAYQ86WG3 371 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 MISPQ8IVT2 679 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 CISD2Q8N5K1 135 aaKnown RBP12.57□□□□□ -0.4
SHMT2-234ENST00000557703 CHDHQ8NE62 594 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-234ENST00000557703 OR2M7Q8NG81 312 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 OR10G3Q8NGC4 313 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 OR9I1Q8NGQ6 314 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 NR4A3Q92570 626 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 THOC1Q96FV9 657 aaKnown RBP12.57□□□□□ -0.4
SHMT2-234ENST00000557703 TMEM41AQ96HV5 264 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SLC35G5Q96KT7 338 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 MARK4Q96L34 752 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 ADOQ96SZ5 270 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SLX1AQ9BQ83 275 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 ZFP64Q9NPA5 681 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 SLC52A3Q9NQ40 469 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 EQTNQ9NQ60 294 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 OLAHQ9NV23 265 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 NDUFAF1Q9Y375 327 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms