RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CLEC4AQ9UMR7 237 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 GPR52Q9Y2T5 361 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 RNF11Q9Y3C5 154 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 PCDHA9Q9Y5H5 950 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 CADP27708 2225 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 SEC14L5O43304 696 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 FADS1O60427 444 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 ABCB7O75027 752 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 KLK1P06870 262 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 PCSK2P16519 638 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 HK1P19367 917 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 PNLIPRP2P54317 469 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 SLC12A2P55011 1212 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 CORO7P57737 925 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 VLDLRP98155 873 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 RUNX1T1Q06455 604 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 FAPQ12884 760 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 PPP1R7Q15435 360 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 CPSF6Q16630 551 aaKnown RBP eCLIP11.21□□□□□ -0.61
PSEN1-221ENST00000557293 ZNF672Q499Z4 452 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-221ENST00000557293 FAM180BQ6P0A1 224 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 NPSR1Q6W5P4 371 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 GGNQ86UU5 652 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 GBP7Q8N8V2 638 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-221ENST00000557293 L3MBTL4Q8NA19 623 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 FBXO36Q8NEA4 188 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 STAG3L4Q8TBR4 150 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 ROBO4Q8WZ75 1007 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 GTPBP3Q969Y2 492 aaKnown RBP11.21□□□□□ -0.61
PSEN1-221ENST00000557293 BTBD9Q96Q07 612 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 TNFRSF13CQ96RJ3 184 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 GPR22Q99680 433 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 GRIP2Q9C0E4 1043 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 MED11Q9P086 117 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.61
PSEN1-221ENST00000557293 DPRXA6NFQ7 191 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 ELOA3DA6NLF2 546 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 E7ESA3 106 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 PGRMC1O00264 195 aaKnown RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 GCM2O75603 506 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 SEMA3DO95025 777 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 S100BP04271 92 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 STMN1P16949 149 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 MRPS35P82673 323 aaKnown RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 LOXL1Q08397 574 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 MORF4L2Q15014 288 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 TMEM44Q2T9K0 475 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 ELOA3BQ3SY89 546 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 MFSD12Q6NUT3 480 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 LARP4Q71RC2 724 aaKnown RBP eCLIP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 DTX2Q86UW9 622 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 MYLK4Q86YV6 388 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 ELOA3Q8NG57 546 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 OR4K17Q8NGC6 315 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 OR4N2Q8NGD1 307 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 ACTRT1Q8TDG2 376 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 TM4SF18Q96CE8 201 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 CNRIP1Q96F85 164 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 TSPAN17Q96FV3 270 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 GMPPAQ96IJ6 420 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 VSTM2LQ96N03 204 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 HBEGFQ99075 208 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 NTMT1Q9BV86 223 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 MRPL1Q9BYD6 325 aaKnown RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 TRIM2Q9C040 744 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 DDX47Q9H0S4 455 aaKnown RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 ESRP2Q9H6T0 727 aaKnown RBP11.2□□□□□ -0.62
PSEN1-221ENST00000557293 SAYSD1Q9NPB0 183 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 NSMCE4AQ9NXX6 385 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 PRODH2Q9UF12 536 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 B3GALT5Q9Y2C3 310 aa11.2□□□□□ -0.62
PSEN1-221ENST00000557293 C1orf226A1L170 272 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 FAM234BA2RU67 622 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 SUPT3HB4E1H0 165 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 H3BML4 177 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 LINC01387J3KSC0 135 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 CLOCKO15516 846 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 SSX4O60224 188 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 KERAO60938 352 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 SUPT3HO75486 399 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 ERAL1O75616 437 aaKnown RBP11.19□□□□□ -0.62
PSEN1-221ENST00000557293 CSNK2A2P19784 350 aaPredicted RBP11.19□□□□□ -0.62
PSEN1-221ENST00000557293 PDIA2Q13087 525 aaKnown RBP11.19□□□□□ -0.62
PSEN1-221ENST00000557293 EFR3AQ14156 821 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 SLMAPQ14BN4 828 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 TSC22D1Q15714 1073 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 C6orf163Q5TEZ5 329 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 RAET1LQ5VY80 246 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 ALKBH2Q6NS38 261 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 BEND4Q6ZU67 534 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 METTL4Q8N3J2 472 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 TRPC4APQ8TEL6 797 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 S100PBPQ96BU1 408 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 ADGRG7Q96K78 797 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 SERPINI1Q99574 410 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 RBBP8Q99708 897 aa11.19□□□□□ -0.62
PSEN1-221ENST00000557293 RHNO1Q9BSD3 238 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms