RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DLGAP4Q9Y2H0 992 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 EEF1E1-BLOC1S5C9J1V9 151 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SLC1A7O00341 560 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SEC14L5O43304 696 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 KCNK5O95279 499 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CRABP1P29762 137 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 PSMB3P49720 205 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 LCN6P62502 163 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CYP1B1Q16678 543 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 OR4K14Q8NGD5 310 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 MYOTQ9UBF9 498 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 AQP2P41181 271 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 GCGRP47871 477 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 DAP3P51398 398 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 GPR50Q13585 617 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 EPGNQ6UW88 154 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 IL31RAQ8NI17 732 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 DUS2Q9NX74 493 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 H7BYZ3 331 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 KDELR3O43731 214 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CNOT4O95628 575 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CALCRP30988 508 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 BDKRB1P46663 353 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 BRCC3P46736 316 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SUMO1P63165 101 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CATR1Q13166 79 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 PSRC1Q6PGN9 363 aaPredicted RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 NFKBIDQ8NI38 313 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 BPIFA2Q96DR5 249 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 AGXT2Q9BYV1 514 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SLC2A4RGQ9NR83 387 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 HAO2Q9NYQ3 351 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CPNE7Q9UBL6 633 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF223Q9UK11 482 aaPredicted RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SLC22A23A1A5C7 686 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 HLA-AP01891 365 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 HLCSP50747 726 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CTSL3PQ5NE16 218 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 ARHGAP40Q5TG30 622 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 TRIB1Q96RU8 372 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 MEAF6Q9HAF1 191 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 GPR83Q9NYM4 423 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 RASD1Q9Y272 281 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CACNA1IQ9P0X4 2223 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 A0A1B0GVT2 93 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 BLACEA4D250 179 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 FASLGP48023 281 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 POM121L1PQ3SYA9 428 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 FAM122BQ7Z309 247 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF34Q8IZ26 560 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 TEPSINQ96N21 525 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 RNF208Q9H0X6 261 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 NPRL3Q12980 569 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 GRIN2CQ14957 1233 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF546Q86UE3 836 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 PITX2Q99697 317 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 REV1Q9UBZ9 1251 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 B3GALT1Q9Y5Z6 326 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 DPM1O60762 260 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 RPL22L1Q6P5R6 122 aaKnown RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 DBX2Q6ZNG2 339 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 OR4C5Q8NGB2 326 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 OR6F1Q8NGZ6 308 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 CPT1BQ92523 772 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 NOL4LQ96MY1 436 aaPredicted RBP8.43□□□□□ -1.06
SYNE3-205ENST00000557275 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
SYNE3-205ENST00000557275 J3QRK9 145 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GPR39O43194 453 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 HTRA2O43464 458 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 EEDO75530 441 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ARHGEF15O94989 841 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 PNMTP11086 282 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 PCBD1P61457 104 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MADCAM1Q13477 382 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 C22orf42Q6IC83 251 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MINDY1Q8N5J2 469 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 FBXL8Q96CD0 374 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CNTNAP1P78357 1384 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 IL3RAP26951 378 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CDKN1CP49918 316 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 RAB28P51157 221 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 WNT4P56705 351 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 LRRC32Q14392 662 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 NFIXQ14938 502 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CST9LP1Q5W188 147 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 FAM205BPQ63HN1 556 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MTURNQ8N3F0 131 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 OR1M1Q8NGA1 313 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TSGA13Q96PP4 275 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MICU1Q9BPX6 476 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 A0A1W2PPM1 405 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 OR5K4A6NMS3 321 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 RAB3DO95716 219 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 PRDX3P30048 256 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CTSOP43234 321 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TAP2Q03519 686 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 KIAA1191Q96A73 305 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ALG12Q9BV10 488 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 AKTIPQ9H8T0 292 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GOLT1BQ9Y3E0 138 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms