RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ZNF678Q5SXM1 525 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 DEPDC1Q5TB30 811 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 HHATQ5VTY9 493 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 KHDRBS2Q5VWX1 349 aaKnown RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 FAM219BQ5XKK7 198 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 FRG2Q64ET8 278 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ZYG11AQ6WRX3 759 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 Q6YL49 198 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 Q6ZPA2 131 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ANKRD37Q7Z713 158 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 TRABD2AQ86V40 505 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 GPR180Q86V85 440 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 NUDCD3Q8IVD9 361 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 C10orf107Q8IVU9 208 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 APLFQ8IW19 511 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 RIBC1Q8N443 379 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ZNF843Q8N446 348 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ANKRD42Q8N9B4 389 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 OR1N1Q8NGS0 311 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 POC1BQ8TC44 478 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 MGARPQ8TDB4 240 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 TCP10LQ8TDR4 215 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ZNF473Q8WTR7 871 aaKnown RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 UBTD2Q8WUN7 234 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 SNRNP27Q8WVK2 155 aaKnown RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 TSLPQ969D9 159 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 PPWD1Q96BP3 646 aaKnown RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 WBP1Q96G27 269 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 RBM18Q96H35 190 aaKnown RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ZIM3Q96PE6 472 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 FRG2BQ96QU4 278 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 KCNA7Q96RP8 456 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 HBEGFQ99075 208 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 SERPINI1Q99574 410 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 LPAR4Q99677 370 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 NTMT1Q9BV86 223 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 NUDT9Q9BW91 350 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 NPLQ9BXD5 320 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 MS4A8Q9BY19 250 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 DEFB126Q9BYW3 111 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 TRIM4Q9C037 500 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ROGDIQ9GZN7 287 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 VN1R1Q9GZP7 353 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 LHPPQ9H008 270 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 ILKAPQ9H0C8 392 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-238ENST00000556288 SLC26A1Q9H2B4 701 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 CDCP1Q9H5V8 836 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 WDR41Q9HAD4 459 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 MLXIPLQ9NP71 852 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 PFDN4Q9NQP4 134 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 NECTIN3Q9NQS3 549 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 SLC17A7Q9P2U7 560 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 FETUBQ9UGM5 382 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 PLLPQ9Y342 182 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 CLCA3PQ9Y6N3 262 aa4.34□□□□□ -1.71
ATXN3-238ENST00000556288 IGSF10Q6WRI0 2623 aa4.34□□□□□ -1.72
ATXN3-238ENST00000556288 ASPMQ8IZT6 3477 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ATRXP46100 2492 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 DIDO1Q9BTC0 2240 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SHANK1Q9Y566 2161 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 IGHV1-45A0A0A0MS14 117 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 DYTNA2CJ06 578 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 WASHC1A8K0Z3 465 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 C4orf51C9J302 202 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 G3V2L1 256 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 H0YIV9 168 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 OR10H2O60403 315 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PLIN3O60664 434 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 UGDHO60701 494 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 DPM1O60762 260 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CTNSO60931 367 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SEC22BO75396 215 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 EEDO75530 441 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PRKRAO75569 313 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ERAL1O75616 437 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MYO1DO94832 1006 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MLYCDO95822 493 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 ONECUT2O95948 504 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 GRPP07492 148 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 NUDT17P0C025 328 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 FAM58BPP0C7Q3 252 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 LINC00032P0C843 101 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PRR35P0CG20 571 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SMIM10L1P0DMW3 83 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 COX6A1P12074 109 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PIK3R1P27986 724 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 GSTM2P28161 218 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SERPINB1P30740 379 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 PIK3CBP42338 1070 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CSRP3P50461 194 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 HNRNPFP52597 415 aaKnown RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 MAPK12P53778 367 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 TAS2R50P59544 299 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 RHAGQ02094 409 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 SLC18A2Q05940 514 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 C2orf80Q0P641 193 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 Q0VFX4 171 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 HLXQ14774 488 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-238ENST00000556288 RASA2Q15283 850 aa4.33□□□□□ -1.72
ATXN3-238ENST00000556288 CNN3Q15417 329 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms