RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SRA1Q9HD15 236 aaKnown RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 HEBP1Q9NRV9 189 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 GLTPQ9NZD2 209 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 NAALAD2Q9Y3Q0 740 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ZFAND5O76080 213 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 CCNOP22674 350 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ARL3P36405 182 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 STK19P49842 368 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 AGTR2P50052 363 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 RGNQ15493 299 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 GARNL3Q5VVW2 1013 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 LRRC56Q8IYG6 542 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 Q8N402 240 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR5AK2Q8NH90 309 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR14A16Q8NHC5 309 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 BTF3L4Q96K17 158 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 KCNA7Q96RP8 456 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ACTR10Q9NZ32 417 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ERVK-18Q9QC07 812 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 TESQ9UGI8 421 aaKnown RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 LOC102723532A0A0G2JNH3 316 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ANTXRLA6NF34 631 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 TCEA1P23193 301 aaKnown RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 APLNRP35414 380 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 RABGGTBP53611 331 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 GRIN2CQ14957 1233 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 KCNJ8Q15842 424 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PKDCCQ504Y2 493 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 NKAPLQ5M9Q1 402 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 DPY19L2P1Q6NXN4 242 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 LRFN4Q6PJG9 635 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 NAPRTQ6XQN6 538 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 TPRA1Q86W33 373 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 GLIS1Q8NBF1 620 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 DNAAF1Q8NEP3 725 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR7G3Q8NG95 312 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR5H2Q8NGV7 314 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 KCTD12Q96CX2 325 aaKnown RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 CRB3Q9BUF7 120 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 APMAPQ9HDC9 416 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 SLC17A6Q9P2U8 582 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 M0R036 132 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF806P0C7X5 589 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 WNT4P56705 351 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ECH1Q13011 328 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 LTB4RQ15722 352 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM201Q5SNT2 666 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 SLC35F1Q5T1Q4 408 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 LYSMD4Q5XG99 296 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 NADSYN1Q6IA69 706 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 PNCKQ6P2M8 343 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM107Q6UX40 140 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF767PQ75MW2 155 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ZBTB46Q86UZ6 589 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 STEAP2Q8NFT2 490 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 OR51D1Q8NGF3 324 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 OR51A7Q8NH64 312 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ACOT11Q8WXI4 607 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-216ENST00000556083 CHRDQ9H2X0 955 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ZCWPW2A0A1B0GU75 182 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 CDHR4A6H8M9 788 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF850A8MQ14 1090 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 GPR137BO60478 399 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ITGB2P05107 769 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 CSN2P05814 226 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 PRSS3P35030 304 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 EIF2DP41214 584 aaKnown RBP10.15□□□□□ -0.78
ACTN1-216ENST00000556083 MAP2K4P45985 399 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 MPP2Q14168 576 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 METTL11BQ5VVY1 283 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 B3GNT9Q6UX72 402 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 C19orf43Q9BQ61 176 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 DMRT3Q9NQL9 472 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 SLCO3A1Q9UIG8 710 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 PLAGL1Q9UM63 463 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 FARSAQ9Y285 508 aaKnown RBP10.15□□□□□ -0.78
ACTN1-216ENST00000556083 USP3Q9Y6I4 520 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 RNF215Q9Y6U7 377 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 LOC285095A0A1B0GVY8 99 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 FAM72CH0Y354 149 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 H3BSA7 217 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 TOR1AO14656 332 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 BEST1O76090 585 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 CTXN1P60606 82 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 DEFA5Q01523 94 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 FAM72AQ5TYM5 149 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 FAM72DQ6L9T8 149 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 FAM72BQ86X60 149 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 CLEC1AQ8NC01 280 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 OR14L1PQ8NHC6 308 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 BORCS7Q96B45 105 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 UPRTQ96BW1 309 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 TCTN2Q96GX1 697 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 PRRT1Q99946 306 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ABCG5Q9H222 651 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 NT5DC2Q9H857 520 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF701Q9NV72 531 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-216ENST00000556083 MYOTQ9UBF9 498 aa10.15□□□□□ -0.78
ACTN1-216ENST00000556083 FTSJ1Q9UET6 329 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms