RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TCTE1Q5JU00 501 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 BROXQ5VW32 411 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DHRS4L2Q6PKH6 230 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CD300LDQ6UXZ3 194 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 RBM44Q6ZP01 1051 aaKnown RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DGLUCYQ7Z3D6 616 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 GALNT5Q7Z7M9 940 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 C11orf74Q86VG3 221 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DEFB119Q8N690 84 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 C7orf57Q8NEG2 295 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 OR7G2Q8NG99 324 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 OR5D16Q8NGK9 328 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ADAMTS15Q8TE58 950 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PHF10Q8WUB8 498 aaKnown RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ANKRD9Q96BM1 317 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SLC35A4Q96G79 324 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ZDHHC12Q96GR4 267 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 ALPK1Q96QP1 1244 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 CSF3RQ99062 836 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 STACQ99469 402 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 KLHL25Q9H0H3 589 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 MIR1-1HGQ9H1L0 117 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SLC38A1Q9H2H9 487 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PIGUQ9H490 435 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 RIBC2Q9H4K1 309 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 DUSP21Q9H596 190 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 EVA1AQ9H8M9 152 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TRIM45Q9H8W5 580 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-235ENST00000556082 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PLCXD1Q9NUJ7 323 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 KIF17Q9P2E2 1029 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SATB2Q9UPW6 733 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 SLC9A8Q9Y2E8 581 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TPRKBQ9Y3C4 175 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 PCDHGB1Q9Y5G3 927 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 GMPPBQ9Y5P6 360 aa7.75□□□□□ -1.17
ATXN3-235ENST00000556082 TRIOBPQ9H2D6 2365 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 EME2A4GXA9 379 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 VGLL3A8MV65 326 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 H0YIG0 161 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 H3BSA7 217 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 PCDH17O14917 1159 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 CHST10O43529 356 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 HCRTR1O43613 425 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 FOXS1O43638 330 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 NUDT21O43809 227 aaKnown RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 CTNSO60931 367 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 SEMA7AO75326 666 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 OR6B1O95007 311 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 NSA2O95478 260 aaKnown RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 AK1P00568 194 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ADAP00813 363 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 H1F0P07305 194 aaKnown RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MSL3P1P0C860 447 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 BCKDHBP21953 392 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 GSTT1P30711 240 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 GALNSP34059 522 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 GGT2P36268 569 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 CSNK1EP49674 416 aaKnown RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 IGLV3-21P80748 117 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 COX10Q12887 443 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MAD2L1BPQ15013 274 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 LTB4RQ15722 352 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MEP1AQ16819 746 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 PRICKLE4Q2TBC4 344 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 CDPF1Q6NVV7 123 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ISLR2Q6UXK2 745 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 B3GNT6Q6ZMB0 384 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 Q7L0L9 218 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 GPR141Q7Z602 305 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ZAR1Q86SH2 424 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF761Q86XN6 746 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 SLC44A2Q8IWA5 706 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF595Q8IYB9 648 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 CDRT4Q8N9R6 151 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 TOR1AIP2Q8NFQ8 470 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 OR6C4Q8NGE1 309 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF420Q8TAQ5 688 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 KAT2AQ92830 837 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MAGED4Q96JG8 741 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF578Q96N58 590 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-235ENST00000556082 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MAP3K3Q99759 626 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ARHGDIGQ99819 225 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 DGCR6LQ9BY27 220 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 YIPF3Q9GZM5 350 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ANKRD19PQ9H560 264 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 ZNF556Q9HAH1 456 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 VCX3AQ9NNX9 186 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 POLE3Q9NRF9 147 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 DUSP22Q9NRW4 184 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 PTTG2Q9NZH5 202 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 TMCC3Q9ULS5 477 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 A4GNTQ9UNA3 340 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MGAT4BQ9UQ53 548 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 IFT52Q9Y366 437 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 KCNE3Q9Y6H6 103 aa7.74□□□□□ -1.17
ATXN3-235ENST00000556082 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms