RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 HSMCR30P0CW71 290 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 CHRNB1P11230 501 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 PIPP12273 146 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-207ENST00000555497 GIPRP48546 466 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 HHEXQ03014 270 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 PUS10Q3MIT2 529 aaKnown RBP22.68■■□□□ 1.22
TMEM260-207ENST00000555497 Q6ZNX1 250 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 LINC00471Q8N535 108 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 OR8J1Q8NGP2 316 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 OR51E2Q9H255 320 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 TTYH1Q9H313 450 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-207ENST00000555497 RNF167Q9H6Y7 350 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 EGLN3Q9H6Z9 239 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 SLC13A4Q9UKG4 626 aa22.68■■□□□ 1.22
TMEM260-207ENST00000555497 C19orf53Q9UNZ5 99 aaPredicted RBP22.68■■□□□ 1.22
TMEM260-207ENST00000555497 OR5K3A6NET4 321 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 ST6GAL1P15907 406 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 RGS6P49758 472 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 CLK1P49759 484 aaKnown RBP22.67■■□□□ 1.22
TMEM260-207ENST00000555497 CDK5Q00535 292 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 NR1D2Q14995 579 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 DEFB110Q30KQ9 67 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 ARHGAP11BQ3KRB8 267 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 ADCK1Q86TW2 530 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 CA13Q8N1Q1 262 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 C9orf43Q8TAL5 461 aaPredicted RBP22.67■■□□□ 1.22
TMEM260-207ENST00000555497 DCSTAMPQ9H295 470 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 PRDM9Q9NQV7 894 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 ZNF443Q9Y2A4 671 aaPredicted RBP22.67■■□□□ 1.22
TMEM260-207ENST00000555497 IFT52Q9Y366 437 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 A0A1W2PPC4 97 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 CNOT3O75175 753 aaKnown RBP22.67■■□□□ 1.22
TMEM260-207ENST00000555497 NDUFA9Q16795 377 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 WDR36Q8NI36 951 aaKnown RBP22.67■■□□□ 1.22
TMEM260-207ENST00000555497 SDF2Q99470 211 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 TPSD1Q9BZJ3 242 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 DSN1Q9H410 356 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 MTHFD2LQ9H903 347 aaPredicted RBP22.67■■□□□ 1.22
TMEM260-207ENST00000555497 ADAP2Q9NPF8 381 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 CLEC2DQ9UHP7 191 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 WDR45Q9Y484 360 aa22.67■■□□□ 1.22
TMEM260-207ENST00000555497 SGK494L7N484 410 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 TLX2O43763 284 aaPredicted RBP22.66■■□□□ 1.22
TMEM260-207ENST00000555497 LIMK1P53667 647 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 GAS6Q14393 721 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 TRAM2Q15035 370 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 MFSD4BQ5TF39 518 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 ZNF367Q7RTV3 350 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 NKAIN4Q8IVV8 208 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 ZDHHC1Q8WTX9 485 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 FGF11Q92914 225 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 LRRC61Q9BV99 259 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 FBXO34Q9NWN3 711 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 CNIH4Q9P003 139 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 PCDHGA3Q9Y5H0 932 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 B4DGG1 531 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 CLDN25C9JDP6 229 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 MBTPS2O43462 519 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 CT62P0C5K7 136 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 CCNYL3P0C7X3 344 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 SPTBP11277 2137 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 EFNB1P98172 346 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 MLLT1Q03111 559 aaPredicted RBP22.66■■□□□ 1.22
TMEM260-207ENST00000555497 ZNF91Q05481 1191 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 MAP4K2Q12851 820 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 MED22Q15528 200 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 OCLNQ16625 522 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 EXOSC6Q5RKV6 272 aaKnown RBP22.66■■□□□ 1.22
TMEM260-207ENST00000555497 ZNF836Q6ZNA1 936 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 DEFB119Q8N690 84 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 OR6Q1Q8NGQ2 317 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 KLHDC7BQ96G42 594 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 Q96MT0 163 aa22.66■■□□□ 1.22
TMEM260-207ENST00000555497 KRBA1A5PL33 1030 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 FAM170BA6NMN3 283 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 GPR75O95800 540 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 ATP1B1P05026 303 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 PCYT1AP49585 367 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 RGS8P57771 180 aaPredicted RBP22.65■■□□□ 1.22
TMEM260-207ENST00000555497 MGAT2Q10469 447 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 SYT13Q7L8C5 426 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 OOSP2Q86WS3 158 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 TMCO5AQ8N6Q1 288 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 OR8D4Q8NGM9 314 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 MGLLQ99685 303 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 TSSK6Q9BXA6 273 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 POLDIP3Q9BY77 421 aaKnown RBP22.65■■□□□ 1.22
TMEM260-207ENST00000555497 POMT2Q9UKY4 750 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 DBTP11182 482 aaKnown RBP22.65■■□□□ 1.22
TMEM260-207ENST00000555497 CKMT1AP12532 417 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 NT5EP21589 574 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 UGT2B10P36537 528 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 EXOSC7Q15024 291 aaKnown RBP22.65■■□□□ 1.22
TMEM260-207ENST00000555497 GPR68Q15743 365 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 MAPK14Q16539 360 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 MANEAQ5SRI9 462 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 MFSD4AQ8N468 514 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 FAM26EQ8N5C1 309 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 PIK3R3Q92569 461 aa22.65■■□□□ 1.22
TMEM260-207ENST00000555497 FAM46AQ96IP4 442 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms