RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ANXA11P50995 505 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 ARG2P78540 354 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 MRPS22P82650 360 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 COX20Q5RI15 118 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 NANOGP8Q6NSW7 305 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 C8orf82Q6P1X6 216 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TMEM81Q6P7N7 255 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 IL20RBQ6UXL0 311 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 Q6ZS92 163 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 ASB18Q6ZVZ8 466 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TRPM8Q7Z2W7 1104 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 HORMAD2Q8N7B1 307 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 RBMXL3Q8N7X1 1067 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 BCORP1Q8N888 145 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 MDS2Q8NDY4 140 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 OR8J3Q8NGG0 315 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 OR5D16Q8NGK9 328 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 PIK3R3Q92569 461 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 DIO2Q92813 273 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TMBIM1Q969X1 311 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 NTNG2Q96CW9 530 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 RCN3Q96D15 328 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 OMA1Q96E52 524 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 SH3GL1Q99961 368 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 HOPXQ9BPY8 73 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 GPATCH1Q9BRR8 931 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 SLC25A18Q9H1K4 315 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 OR51I1Q9H343 314 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 NANOGQ9H9S0 305 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 EXD2Q9NVH0 621 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 ARL8BQ9NVJ2 186 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 HPF1Q9NWY4 346 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 THUMPD1Q9NXG2 353 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TAGLN3Q9UI15 199 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 MRTO4Q9UKD2 239 aaKnown RBP11.68□□□□□ -0.54
SYNE2-219ENST00000555323 CORO2BQ9UQ03 480 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 TP53TG5Q9Y2B4 290 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 OR10H1Q9Y4A9 318 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 CACNA1BQ00975 2339 aa11.68□□□□□ -0.54
SYNE2-219ENST00000555323 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 GXYLT2A0PJZ3 443 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 ANKRD33BA6NCL7 494 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 EVPLLA8MZ36 301 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 AIM2O14862 343 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 TNFRSF21O75509 655 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 REM1O75628 298 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 OR12D1P0DN82 309 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 T-ENOLP0DO92 83 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CASRP41180 1078 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CD97P48960 835 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 PSMD4P55036 377 aaKnown RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 RPS26P62854 115 aaKnown RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 POU6F2P78424 691 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CBX1P83916 185 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 PLCXD2Q0VAA5 305 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 OR1C1Q15619 314 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 NNATQ16517 81 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 DECR1Q16698 335 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 ARHGAP11BQ3KRB8 267 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 LACTB2Q53H82 288 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 SPINK14Q6IE38 97 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 RTL4Q6ZR62 310 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 COX18Q8N8Q8 333 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CATSPER1Q8NEC5 780 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 PAQR8Q8TEZ7 354 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 RNF138Q8WVD3 245 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 XAGE5Q8WWM1 108 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 JADE3Q92613 823 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CDS1Q92903 461 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 HGDQ93099 445 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 SCMH1Q96GD3 660 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 NSL1Q96IY1 281 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 COL21A1Q96P44 957 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 SIGLEC12Q96PQ1 595 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 SDF2Q99470 211 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CPPED1Q9BRF8 314 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 G6PC3Q9BUM1 346 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 SAP130Q9H0E3 1048 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 IKZF5Q9H5V7 419 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CNIH4Q9P003 139 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 LIPT1Q9Y234 373 aa11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
SYNE2-219ENST00000555323 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 TRAV17A0A0B4J275 112 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 PRAMEF27A3QJZ7 478 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 TP53I11O14683 189 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 UGT2B11O75310 529 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 IGKV1D-16P01601 117 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 TFPTP0C1Z6 253 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 SLC6A2P23975 617 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 CRATP43155 626 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 KHKP50053 298 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 MNAT1P51948 309 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 CASP9P55211 416 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 ART3Q13508 389 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 EFR3AQ14156 821 aa11.66□□□□□ -0.54
SYNE2-219ENST00000555323 SLC22A10Q63ZE4 541 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms