RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ITPAQ9BY32 194 aa9.76□□□□□ -0.85
TMEM260-206ENST00000555046 NXF5Q9H1B4 397 aaKnown RBP9.76□□□□□ -0.85
TMEM260-206ENST00000555046 ZCCHC3Q9NUD5 404 aaKnown RBP9.76□□□□□ -0.85
TMEM260-206ENST00000555046 LUZP4Q9P127 313 aa9.76□□□□□ -0.85
TMEM260-206ENST00000555046 CSAG2Q9Y5P2 127 aa9.76□□□□□ -0.85
TMEM260-206ENST00000555046 SCN2AQ99250 2005 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 A0A0G2JND7 137 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 FAM234BA2RU67 622 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ASPDHA6ND91 283 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 PSMG1O95456 288 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 NADKO95544 446 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ABCB1P08183 1280 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 CT45A8P0DMV1 189 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 CT45A9P0DMV2 189 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 EDN3P14138 238 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 NCF2P19878 526 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 SOX18P35713 384 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 MAGEA8P43361 318 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 POLR2JP52435 117 aaKnown RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 NME5P56597 212 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 KCNK10P57789 538 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 RBPJQ06330 500 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 GAB1Q13480 694 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 CT45A2Q5DJT8 189 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 OR4F3Q6IEY1 312 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 SLC30A6Q6NXT4 461 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 TMEM81Q6P7N7 255 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 MDGA2Q7Z553 956 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 FBXW8Q8N3Y1 598 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ZFP62Q8NB50 900 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 OR4A15Q8NGL6 344 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 GOT1L1Q8NHS2 421 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 SPPL2AQ8TCT8 520 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ADAMTS15Q8TE58 950 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 GRHL3Q8TE85 626 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 DIO2Q92813 273 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 OMA1Q96E52 524 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 CCDC115Q96NT0 180 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 PANX1Q96RD7 426 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 STACQ99469 402 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 G6PC3Q9BUM1 346 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ACTRT3Q9BYD9 372 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 NPHS2Q9NP85 383 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 SDHAF3Q9NRP4 125 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 DUSP22Q9NRW4 184 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 ASF1BQ9NVP2 202 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 B4GALT7Q9UBV7 327 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 DCTN4Q9UJW0 460 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 CBLCQ9ULV8 474 aa9.75□□□□□ -0.85
TMEM260-206ENST00000555046 BOKQ9UMX3 212 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-206ENST00000555046 PCSK5Q92824 1860 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 RFXANKO14593 260 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 NKX2-2O95096 273 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ANP32DO95626 131 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 CPSF4O95639 269 aaKnown RBP9.74□□□□□ -0.85
TMEM260-206ENST00000555046 KRT75O95678 551 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 AK1P00568 194 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ZNF24P17028 368 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 PTGER1P34995 402 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 PIGAP37287 484 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 TRPC1P48995 793 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 CDK9P50750 372 aaKnown RBP9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ARFIP2P53365 341 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 KCNJ2P63252 427 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 HBA1P69905 142 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 PSG6Q00889 435 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 PLGLB1Q02325 96 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 DUSP8Q13202 625 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 SQLEQ14534 574 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 SPANXN4Q5MJ08 99 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ZNF621Q6ZSS3 439 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ZNF227Q86WZ6 799 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 OR10G3Q8NGC4 313 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 OR5M3Q8NGP4 307 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 NR4A3Q92570 626 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 SLC9A6Q92581 669 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 TMBIM1Q969X1 311 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 MIB2Q96AX9 1013 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 CHMP6Q96FZ7 201 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 SLC35A4Q96G79 324 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ITCHQ96J02 903 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 EBF4Q9BQW3 602 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 DOHHQ9BU89 302 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ANGPTL4Q9BY76 406 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 HOXD1Q9GZZ0 328 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 METTL7AQ9H8H3 244 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 ANKRA2Q9H9E1 313 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 IL1RL2Q9HB29 575 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 SH2D2AQ9NP31 389 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 EQTNQ9NQ60 294 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 EXD2Q9NVH0 621 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 FGFR1OP2Q9NVK5 253 aa9.74□□□□□ -0.85
TMEM260-206ENST00000555046 CHCHD2Q9Y6H1 151 aaPredicted RBP9.74□□□□□ -0.85
TMEM260-206ENST00000555046 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.74□□□□□ -0.85
TMEM260-206ENST00000555046 CCDC154A6NI56 674 aa9.73□□□□□ -0.85
TMEM260-206ENST00000555046 TFECO14948 347 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms