RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CDK5R2Q13319 367 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DGCR6Q14129 220 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 EXOSC7Q15024 291 aaKnown RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 MEP1AQ16819 746 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 CD300LDQ6UXZ3 194 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NPSR1Q6W5P4 371 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 ZNF615Q8N8J6 731 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 ZNF555Q8NEP9 628 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 SGCDQ92629 289 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DIO2Q92813 273 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FGF11Q92914 225 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 MVB12AQ96EY5 273 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 PEX11GQ96HA9 241 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 PRRC1Q96M27 445 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NUDT22Q9BRQ3 303 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 DGCR6LQ9BY27 220 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 NECTIN3Q9NQS3 549 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 KRT84Q9NSB2 600 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 FBXO34Q9NWN3 711 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 CALML5Q9NZT1 146 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 RHCGQ9UBD6 479 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 ZNF443Q9Y2A4 671 aaPredicted RBP8.29□□□□□ -1.08
TDP1-210ENST00000554976 DTX4Q9Y2E6 619 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 CEPT1Q9Y6K0 416 aa8.29□□□□□ -1.08
TDP1-210ENST00000554976 SH3PXD2BA1X283 911 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 AGAP5A6NIR3 686 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 BRINP1O60477 761 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 OXSR1O95747 527 aaPredicted RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 IGKV1D-16P01601 117 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ANXA8P13928 327 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 JUNBP17275 347 aaPredicted RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 PCMT1P22061 227 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ALDH4A1P30038 563 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 TRHRP34981 398 aaPredicted RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 NR1H2P55055 460 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 HSD17B7P56937 341 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CSTF1Q05048 431 aaKnown RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 COX15Q7KZN9 410 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 B3GNT8Q7Z7M8 397 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 PLXDC1Q8IUK5 500 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 SLC44A2Q8IWA5 706 aaPredicted RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 ENTHD1Q8IYW4 607 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ZNF786Q8N393 782 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CDRT4Q8N9R6 151 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 OR51Q1Q8NH59 317 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 PROX1Q92786 737 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ALPK1Q96QP1 1244 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 POLE3Q9NRF9 147 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CUTCQ9NTM9 273 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 POFUT2Q9Y2G5 429 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ARID1BQ8NFD5 2236 aaPredicted RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 NPIPB9F8W1W9 429 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CCNB2O95067 398 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ONECUT2O95948 504 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ACVR2AP27037 513 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 GGT2P36268 569 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ARHGDIAP52565 204 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 RHAGQ02094 409 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 TEKQ02763 1124 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 GRM7Q14831 915 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 MAD2L1BPQ15013 274 aaPredicted RBP8.28□□□□□ -1.08
TDP1-210ENST00000554976 MAPK14Q16539 360 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ZNF528Q3MIS6 628 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 DCST2Q5T1A1 773 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 MLIPQ5VWP3 458 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 PGBD2Q6P3X8 592 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 GUSBP11Q6P575 273 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 TMEM71Q6P5X7 295 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 SLC23A3Q6PIS1 610 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 HMGN2P46Q86SG4 172 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 GATAD2AQ86YP4 633 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CLIP4Q8N3C7 705 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 ZBTB44Q8NCP5 570 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 OR52R1Q8NGF1 315 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 OR52J3Q8NH60 311 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 PMM1Q92871 262 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 DUSP23Q9BVJ7 150 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 SPATA5L1Q9BVQ7 753 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 SUSD2Q9UGT4 822 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 HCN4Q9Y3Q4 1203 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CPAMD8Q8IZJ3 1885 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 CACNA1EQ15878 2313 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
TDP1-210ENST00000554976 SMIM31A0A1B0GVY4 71 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 GXYLT2A0PJZ3 443 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 TRIM64BA6NI03 449 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ZAR1LA6NP61 321 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 SLC1A7O00341 560 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 FAAHO00519 579 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 YKT6O15498 198 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 KLF4O43474 513 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 LAMTOR5O43504 91 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 SIGLEC6O43699 453 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 ALPPP05187 535 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 GNSP15586 552 aa8.27□□□□□ -1.08
TDP1-210ENST00000554976 MAOAP21397 527 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms