RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 KCNC4Q03721 635 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 AQP6Q13520 282 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 HEPACAMQ14CZ8 416 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 SPCS2Q15005 226 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 MPEG1Q2M385 716 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 PRTGQ2VWP7 1150 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 COX20Q5RI15 118 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 ENTHD1Q8IYW4 607 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 ZNF655Q8N720 491 aaPredicted RBP16.25■□□□□ 0.19
SHOX-204ENST00000554971 MFSD9Q8NBP5 474 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 RHOXF1Q8NHV9 184 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 TAMM41Q96BW9 452 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 COX4I2Q96KJ9 171 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 FEVQ99581 238 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 PIP5K1AQ99755 562 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 ZNF556Q9HAH1 456 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 SERTAD3Q9UJW9 196 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 CLDN25C9JDP6 229 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 ZSCAN9O15535 394 aaPredicted RBP16.25■□□□□ 0.19
SHOX-204ENST00000554971 ZNF749O43361 778 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 SCRG1O75711 98 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 MT-ND2P03891 347 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 XCR1P46094 333 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 TRA2BP62995 288 aaKnown RBP16.25■□□□□ 0.19
SHOX-204ENST00000554971 HYAL2Q12891 473 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 KHDRBS2Q5VWX1 349 aaKnown RBP16.25■□□□□ 0.19
SHOX-204ENST00000554971 REEP3Q6NUK4 255 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 CCDC71Q8IV32 467 aaPredicted RBP16.25■□□□□ 0.19
SHOX-204ENST00000554971 OR8K5Q8NH50 307 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 NFKBIDQ8NI38 313 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 CREB3L4Q8TEY5 395 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 C10orf90Q96M02 699 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 AKIRIN1Q9H9L7 192 aaPredicted RBP16.25■□□□□ 0.19
SHOX-204ENST00000554971 NEUROD4Q9HD90 331 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 PSORS1C1Q9UIG5 152 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 ENPP4Q9Y6X5 453 aa16.25■□□□□ 0.19
SHOX-204ENST00000554971 NUP214P35658 2090 aaPredicted RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 MPZL2O60487 215 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 PDE9AO76083 593 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 IL3P08700 152 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 TPP2P29144 1249 aaPredicted RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 RBMS1P29558 406 aaKnown RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 AQP1P29972 269 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 AHRP35869 848 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 KRT20P35900 424 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 LIMS1P48059 325 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 DSTNP60981 165 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 TUBA1BP68363 451 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 CYP4F2P78329 520 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 MC1RQ01726 317 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 TUBA1AQ71U36 451 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 TIPARPQ7Z3E1 657 aaKnown RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 BPHLQ86WA6 291 aaPredicted RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 RNF130Q86XS8 419 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 CSNK1A1LQ8N752 337 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 KCT2Q8NC54 265 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 CHPT1Q8WUD6 406 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 CIDECQ96AQ7 238 aaPredicted RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 NEURL3Q96EH8 262 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 SH3YL1Q96HL8 342 aaPredicted RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 TEFMQ96QE5 360 aaKnown RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 MAPKAP1Q9BPZ7 522 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 ULBP3Q9BZM4 244 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 B3GNT4Q9C0J1 378 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 SLC6A16Q9GZN6 736 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 A4GALTQ9NPC4 353 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 FKBP14Q9NWM8 211 aa16.24■□□□□ 0.19
SHOX-204ENST00000554971 DHCR7Q9UBM7 475 aaKnown RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 MRPS2Q9Y399 296 aaKnown RBP16.24■□□□□ 0.19
SHOX-204ENST00000554971 NDUFS4O43181 175 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 STK17BO94768 372 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 SPIBQ01892 262 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 TBCEQ15813 527 aaPredicted RBP16.23■□□□□ 0.19
SHOX-204ENST00000554971 TCTE1Q5JU00 501 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 TMEM164Q5U3C3 297 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 GPR135Q8IZ08 494 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 SLC5A8Q8N695 610 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 PHF10Q8WUB8 498 aaKnown RBP16.23■□□□□ 0.19
SHOX-204ENST00000554971 APH1BQ8WW43 257 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 ZPBPQ9BS86 351 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 MS4A8Q9BY19 250 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 ACSL6Q9UKU0 697 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 RNF6Q9Y252 685 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 ERGIC3Q9Y282 383 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 TESMINQ9Y4I5 508 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 TMEM184BQ9Y519 407 aaPredicted RBP16.23■□□□□ 0.19
SHOX-204ENST00000554971 CACNA1GO43497 2377 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 CLCA1A8K7I4 914 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 C4orf51C9J302 202 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 DLGAP3O95886 979 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 EPHA2P29317 976 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 MASP1P48740 699 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 MAPK12P53778 367 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 MLC1Q15049 377 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 TBC1D25Q3MII6 688 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 SAXO2Q658L1 398 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 ZNF385CQ66K41 422 aaPredicted RBP16.23■□□□□ 0.19
SHOX-204ENST00000554971 ZNF605Q86T29 641 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 ASPGQ86U10 573 aa16.23■□□□□ 0.19
SHOX-204ENST00000554971 SLC15A4Q8N697 577 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms