RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 NEURL1O76050 574 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 ZFAND5O76080 213 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 STSP08842 583 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 COX7A2P14406 83 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 MST1P26927 711 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 TIA1P31483 386 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 KIR3DL1P43629 444 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 MTPNP58546 118 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 RAE1P78406 368 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 ALDH6A1Q02252 535 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 ID2Q02363 134 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 MED21Q13503 144 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF468Q5VIY5 522 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 C1QL3Q5VWW1 255 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 GLYATQ6IB77 296 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 HMBOX1Q6NT76 420 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 GALNT18Q6P9A2 607 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 CAMKMTQ7Z624 323 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 FJX1Q86VR8 437 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 PACRGLQ8N7B6 248 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 C7orf57Q8NEG2 295 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 OR8J2Q8NGG1 315 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 OR14A16Q8NHC5 309 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 EME1Q96AY2 570 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 SCMH1Q96GD3 660 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF583Q96ND8 569 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 CPPED1Q9BRF8 314 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 SORBS1Q9BX66 1292 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 OR8D2Q9GZM6 311 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 RPF2Q9H7B2 306 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 GORASP2Q9H8Y8 452 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 C8orf4Q9NR00 106 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 FAM120CQ9NX05 1096 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 PPIEQ9UNP9 301 aaKnown RBP11.52□□□□□ -0.57
SHMT2-214ENST00000554604 CLDN16Q9Y5I7 305 aa11.52□□□□□ -0.57
SHMT2-214ENST00000554604 CYSRT1A8MQ03 144 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 C17orf105B2RV13 164 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 DYRK3O43781 588 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 NME2P1O60361 137 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 GMNNO75496 209 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 TIPRLO75663 272 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ETHE1O95571 254 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 NCK1P16333 377 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF26P17031 533 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 NME2P22392 152 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 FASP25445 335 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 PTPN6P29350 595 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 TRHRP34981 398 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 BUD31P41223 144 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 SSR4P51571 173 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ARFIP1P53367 373 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 CASP6P55212 293 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 LRRC74AQ0VAA2 488 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 CYP51A1Q16850 503 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 HSDL2Q6YN16 418 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 MAMDC2Q7Z304 686 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 CALHM3Q86XJ0 350 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 CYP4Z2PQ8N1L4 340 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ARMC10Q8N2F6 343 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ZCCHC7Q8N3Z6 543 aaKnown RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 MARVELD2Q8N4S9 558 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 C1orf52Q8N6N3 182 aaKnown RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 MORN4Q8NDC4 146 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 OR2T12Q8NG77 320 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 TANKQ92844 425 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 RBM18Q96H35 190 aaKnown RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 EGLN2Q96KS0 407 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 DGAT2Q96PD7 388 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 THUMPD3Q9BV44 507 aaKnown RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 EBPLQ9BY08 206 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 TSPAN10Q9H1Z9 355 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 KAT8Q9H7Z6 458 aaKnown RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 COPS7AQ9UBW8 275 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 USP22Q9UPT9 525 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 AURKCQ9UQB9 309 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ERVK-11Q9UQG0 969 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 KLF13Q9Y2Y9 288 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 YARS2Q9Y2Z4 477 aaKnown RBP11.51□□□□□ -0.57
SHMT2-214ENST00000554604 PCDHB14Q9Y5E9 798 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 ITPR2Q14571 2701 aa11.51□□□□□ -0.57
SHMT2-214ENST00000554604 TRGV8A0A0C4DH27 118 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 NPIPA5E9PKD4 350 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 SCAMP2O15127 329 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 AKAP10O43572 662 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 SCN2BO60939 215 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 OR2J2O76002 312 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 LRATO95237 230 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ANXA4P09525 319 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 HOXB6P17509 224 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 HPCAL1P37235 193 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 RPL3P39023 403 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 GZMMP51124 257 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 GPR143P51810 404 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 WNT3P56703 355 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PLIN5Q00G26 463 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 TNFRSF17Q02223 184 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms