RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 RAP1GDS1P52306 607 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 GPX6P59796 221 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 BSPH1Q075Z2 132 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 FAPQ12884 760 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 DDX39BQ13838 428 aaKnown RBP8.08□□□□□ -1.12
PRKCH-208ENST00000553846 TAB1Q15750 504 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-208ENST00000553846 NRF1Q16656 503 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 FAM120AOSQ5T036 256 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 IL17RELQ6ZVW7 336 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 WDR20Q8TBZ3 569 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 PIWIL2Q8TC59 973 aaKnown RBP8.08□□□□□ -1.12
PRKCH-208ENST00000553846 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
PRKCH-208ENST00000553846 MAGOHBQ96A72 148 aaKnown RBP8.08□□□□□ -1.12
PRKCH-208ENST00000553846 C1orf159Q96HA4 380 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 GMPPAQ96IJ6 420 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-208ENST00000553846 VSTM2LQ96N03 204 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 ZNF681Q96N22 645 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 ATOH8Q96SQ7 321 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 RHOJQ9H4E5 214 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 SMYD2Q9NRG4 433 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 ARFGEF3Q5TH69 2177 aa8.08□□□□□ -1.12
PRKCH-208ENST00000553846 A0A1W2PP18 115 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 VWC2LB2RUY7 222 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 LINC01387J3KSC0 135 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 K7EPI3 171 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 DNALI1O14645 258 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CLOCKO15516 846 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 SEC14L5O43304 696 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 SSX4O60224 188 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 LMX1BO60663 402 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 RAMP1O60894 148 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 NME6O75414 186 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 SEMA3DO95025 777 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 ALDOAP04075 364 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CCDC166P0CW27 439 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 MTHFD2P13995 350 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 SLC25A16P16260 332 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 PORP16435 677 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 PCSK2P16519 638 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 NT5EP21589 574 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 PTX3P26022 381 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 PIK3R1P27986 724 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 AGTR1P30556 359 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 ELK3P41970 407 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CORO7P57737 925 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 EEFSECP57772 596 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 DLG1Q12959 904 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 GANABQ14697 944 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 LTB4RQ15722 352 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 TRMT12Q53H54 448 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 SLC48A1Q6P1K1 146 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CCDC137Q6PK04 289 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 TFAP2EQ6VUC0 442 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 NUDT13Q86X67 352 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 ZNF525Q8N782 197 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 OR4K14Q8NGD5 310 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 OR52R1Q8NGF1 315 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 OR5M1Q8NGP8 315 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 C10orf105Q8TEF2 133 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 TMCO6Q96DC7 493 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 HS6ST2Q96MM7 605 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 ADOQ96SZ5 270 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 RHNO1Q9BSD3 238 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 NTMT1Q9BV86 223 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CAB39LQ9H9S4 337 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 PPANQ9NQ55 473 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 FLRT3Q9NZU0 649 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CLEC4AQ9UMR7 237 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CHMP2BQ9UQN3 213 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 CFL2Q9Y281 166 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 MTO1Q9Y2Z2 717 aaKnown RBP8.07□□□□□ -1.12
PRKCH-208ENST00000553846 EMC9Q9Y3B6 208 aa8.07□□□□□ -1.12
PRKCH-208ENST00000553846 IGLV3-32A0A0A0MS00 114 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 FOXE1O00358 373 aaPredicted RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 PHGDHO43175 533 aaKnown RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 FADS1O60427 444 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 PIAS1O75925 651 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CD3EP07766 207 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 HK1P19367 917 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 PSMA4P25789 261 aaKnown RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 EVI2BP34910 448 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 DSCR9P59020 149 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ATP6V0D1P61421 351 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 MRPS35P82673 323 aaKnown RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 MGAT5Q09328 741 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 FASTKD3Q14CZ7 662 aaKnown RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 TSC22D1Q15714 1073 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ZNF628Q5EBL2 1059 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 HP1BP3Q5SSJ5 553 aaPredicted RBP8.06□□□□□ -1.12
PRKCH-208ENST00000553846 RAET1LQ5VY80 246 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CYB5R2Q6BCY4 276 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 MFSD12Q6NUT3 480 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CYP20A1Q6UW02 462 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ZNF662Q6ZS27 426 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 BEND4Q6ZU67 534 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 CHMP1BQ7LBR1 199 aa8.06□□□□□ -1.12
PRKCH-208ENST00000553846 ISCA2Q86U28 154 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms